Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G34180

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006793: phosphorus metabolic process0.00E+00
2GO:0080052: response to histidine0.00E+00
3GO:0046865: terpenoid transport0.00E+00
4GO:0010499: proteasomal ubiquitin-independent protein catabolic process0.00E+00
5GO:0033542: fatty acid beta-oxidation, unsaturated, even number0.00E+00
6GO:0006497: protein lipidation0.00E+00
7GO:0006182: cGMP biosynthetic process0.00E+00
8GO:0072722: response to amitrole0.00E+00
9GO:0006592: ornithine biosynthetic process0.00E+00
10GO:0080169: cellular response to boron-containing substance deprivation0.00E+00
11GO:0010055: atrichoblast differentiation0.00E+00
12GO:0043201: response to leucine0.00E+00
13GO:0042430: indole-containing compound metabolic process0.00E+00
14GO:0080053: response to phenylalanine0.00E+00
15GO:0043620: regulation of DNA-templated transcription in response to stress0.00E+00
16GO:0042742: defense response to bacterium2.36E-07
17GO:0009617: response to bacterium1.10E-06
18GO:0006468: protein phosphorylation1.79E-06
19GO:0071456: cellular response to hypoxia1.93E-06
20GO:0010150: leaf senescence5.70E-06
21GO:0009620: response to fungus6.62E-06
22GO:0002238: response to molecule of fungal origin8.62E-06
23GO:0006952: defense response2.68E-05
24GO:0006874: cellular calcium ion homeostasis3.05E-05
25GO:0010120: camalexin biosynthetic process4.74E-05
26GO:0032259: methylation1.51E-04
27GO:0006536: glutamate metabolic process1.57E-04
28GO:0009751: response to salicylic acid1.63E-04
29GO:0002237: response to molecule of bacterial origin2.35E-04
30GO:0009817: defense response to fungus, incompatible interaction4.20E-04
31GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response4.50E-04
32GO:0009407: toxin catabolic process4.90E-04
33GO:0010265: SCF complex assembly5.40E-04
34GO:0032491: detection of molecule of fungal origin5.40E-04
35GO:0042759: long-chain fatty acid biosynthetic process5.40E-04
36GO:0032107: regulation of response to nutrient levels5.40E-04
37GO:0051938: L-glutamate import5.40E-04
38GO:0099132: ATP hydrolysis coupled cation transmembrane transport5.40E-04
39GO:0010726: positive regulation of hydrogen peroxide metabolic process5.40E-04
40GO:0010421: hydrogen peroxide-mediated programmed cell death5.40E-04
41GO:1901183: positive regulation of camalexin biosynthetic process5.40E-04
42GO:0050832: defense response to fungus7.58E-04
43GO:0010204: defense response signaling pathway, resistance gene-independent8.74E-04
44GO:0009636: response to toxic substance1.07E-03
45GO:1902000: homogentisate catabolic process1.16E-03
46GO:0006423: cysteinyl-tRNA aminoacylation1.16E-03
47GO:0030003: cellular cation homeostasis1.16E-03
48GO:0042325: regulation of phosphorylation1.16E-03
49GO:0019441: tryptophan catabolic process to kynurenine1.16E-03
50GO:0043091: L-arginine import1.16E-03
51GO:0051592: response to calcium ion1.16E-03
52GO:0080183: response to photooxidative stress1.16E-03
53GO:0015802: basic amino acid transport1.16E-03
54GO:0009805: coumarin biosynthetic process1.16E-03
55GO:0009866: induced systemic resistance, ethylene mediated signaling pathway1.16E-03
56GO:0043066: negative regulation of apoptotic process1.16E-03
57GO:0002240: response to molecule of oomycetes origin1.16E-03
58GO:0042939: tripeptide transport1.16E-03
59GO:0010200: response to chitin1.18E-03
60GO:0009682: induced systemic resistance1.66E-03
61GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway1.91E-03
62GO:0006556: S-adenosylmethionine biosynthetic process1.91E-03
63GO:0010351: lithium ion transport1.91E-03
64GO:0010272: response to silver ion1.91E-03
65GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway1.91E-03
66GO:0015692: lead ion transport1.91E-03
67GO:0006790: sulfur compound metabolic process1.91E-03
68GO:0009072: aromatic amino acid family metabolic process1.91E-03
69GO:0012501: programmed cell death1.91E-03
70GO:0080168: abscisic acid transport1.91E-03
71GO:1900055: regulation of leaf senescence1.91E-03
72GO:0034051: negative regulation of plant-type hypersensitive response1.91E-03
73GO:0010498: proteasomal protein catabolic process1.91E-03
74GO:0055046: microgametogenesis2.17E-03
75GO:0009627: systemic acquired resistance2.17E-03
76GO:0046854: phosphatidylinositol phosphorylation2.74E-03
77GO:0006882: cellular zinc ion homeostasis2.76E-03
78GO:0046513: ceramide biosynthetic process2.76E-03
79GO:0010116: positive regulation of abscisic acid biosynthetic process2.76E-03
80GO:0019438: aromatic compound biosynthetic process2.76E-03
81GO:0048194: Golgi vesicle budding2.76E-03
82GO:0033169: histone H3-K9 demethylation2.76E-03
83GO:0070301: cellular response to hydrogen peroxide2.76E-03
84GO:0006499: N-terminal protein myristoylation3.00E-03
85GO:0055114: oxidation-reduction process3.10E-03
86GO:2000377: regulation of reactive oxygen species metabolic process3.40E-03
87GO:0080142: regulation of salicylic acid biosynthetic process3.72E-03
88GO:0042938: dipeptide transport3.72E-03
89GO:0045227: capsule polysaccharide biosynthetic process3.72E-03
90GO:1901002: positive regulation of response to salt stress3.72E-03
91GO:0033358: UDP-L-arabinose biosynthetic process3.72E-03
92GO:0007165: signal transduction3.86E-03
93GO:0003333: amino acid transmembrane transport4.13E-03
94GO:0016998: cell wall macromolecule catabolic process4.13E-03
95GO:0006631: fatty acid metabolic process4.47E-03
96GO:0046686: response to cadmium ion4.53E-03
97GO:0042542: response to hydrogen peroxide4.71E-03
98GO:0000304: response to singlet oxygen4.78E-03
99GO:0030308: negative regulation of cell growth4.78E-03
100GO:0009697: salicylic acid biosynthetic process4.78E-03
101GO:0009561: megagametogenesis5.37E-03
102GO:0006561: proline biosynthetic process5.92E-03
103GO:0010942: positive regulation of cell death5.92E-03
104GO:0010256: endomembrane system organization5.92E-03
105GO:1900425: negative regulation of defense response to bacterium5.92E-03
106GO:0006812: cation transport6.63E-03
107GO:0042538: hyperosmotic salinity response6.63E-03
108GO:0007166: cell surface receptor signaling pathway6.88E-03
109GO:0010555: response to mannitol7.16E-03
110GO:2000067: regulation of root morphogenesis7.16E-03
111GO:0009809: lignin biosynthetic process7.26E-03
112GO:0042752: regulation of circadian rhythm7.31E-03
113GO:0002229: defense response to oomycetes8.41E-03
114GO:0010193: response to ozone8.41E-03
115GO:0050829: defense response to Gram-negative bacterium8.47E-03
116GO:1902074: response to salt8.47E-03
117GO:0006744: ubiquinone biosynthetic process8.47E-03
118GO:1900056: negative regulation of leaf senescence8.47E-03
119GO:0030026: cellular manganese ion homeostasis8.47E-03
120GO:0019745: pentacyclic triterpenoid biosynthetic process8.47E-03
121GO:0000122: negative regulation of transcription from RNA polymerase II promoter8.47E-03
122GO:0009753: response to jasmonic acid9.32E-03
123GO:1900150: regulation of defense response to fungus9.87E-03
124GO:0030091: protein repair9.87E-03
125GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline9.87E-03
126GO:0009819: drought recovery9.87E-03
127GO:0009850: auxin metabolic process9.87E-03
128GO:0043068: positive regulation of programmed cell death9.87E-03
129GO:0010252: auxin homeostasis1.02E-02
130GO:0010497: plasmodesmata-mediated intercellular transport1.13E-02
131GO:0006526: arginine biosynthetic process1.13E-02
132GO:0017004: cytochrome complex assembly1.13E-02
133GO:0009808: lignin metabolic process1.13E-02
134GO:0009699: phenylpropanoid biosynthetic process1.13E-02
135GO:0015996: chlorophyll catabolic process1.13E-02
136GO:0007186: G-protein coupled receptor signaling pathway1.13E-02
137GO:0051607: defense response to virus1.15E-02
138GO:0009615: response to virus1.22E-02
139GO:0010112: regulation of systemic acquired resistance1.29E-02
140GO:0009816: defense response to bacterium, incompatible interaction1.29E-02
141GO:0007338: single fertilization1.29E-02
142GO:0009821: alkaloid biosynthetic process1.29E-02
143GO:0051865: protein autoubiquitination1.29E-02
144GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway1.45E-02
145GO:0008202: steroid metabolic process1.45E-02
146GO:2000280: regulation of root development1.45E-02
147GO:0008219: cell death1.60E-02
148GO:0006032: chitin catabolic process1.62E-02
149GO:0009688: abscisic acid biosynthetic process1.62E-02
150GO:0043069: negative regulation of programmed cell death1.62E-02
151GO:0055062: phosphate ion homeostasis1.62E-02
152GO:0009870: defense response signaling pathway, resistance gene-dependent1.62E-02
153GO:0000272: polysaccharide catabolic process1.80E-02
154GO:0009750: response to fructose1.80E-02
155GO:0006816: calcium ion transport1.80E-02
156GO:0009089: lysine biosynthetic process via diaminopimelate1.80E-02
157GO:0007568: aging1.85E-02
158GO:0071365: cellular response to auxin stimulus1.98E-02
159GO:0000266: mitochondrial fission1.98E-02
160GO:0015706: nitrate transport1.98E-02
161GO:0002213: defense response to insect1.98E-02
162GO:0006633: fatty acid biosynthetic process2.03E-02
163GO:0009718: anthocyanin-containing compound biosynthetic process2.17E-02
164GO:0006626: protein targeting to mitochondrion2.17E-02
165GO:0009737: response to abscisic acid2.33E-02
166GO:0010143: cutin biosynthetic process2.36E-02
167GO:0070588: calcium ion transmembrane transport2.56E-02
168GO:0010053: root epidermal cell differentiation2.56E-02
169GO:0009969: xyloglucan biosynthetic process2.56E-02
170GO:0009225: nucleotide-sugar metabolic process2.56E-02
171GO:0010167: response to nitrate2.56E-02
172GO:0051707: response to other organism2.62E-02
173GO:0010025: wax biosynthetic process2.77E-02
174GO:0030150: protein import into mitochondrial matrix2.98E-02
175GO:0005992: trehalose biosynthetic process2.98E-02
176GO:0080147: root hair cell development2.98E-02
177GO:0006855: drug transmembrane transport3.06E-02
178GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process3.17E-02
179GO:0009695: jasmonic acid biosynthetic process3.20E-02
180GO:0031408: oxylipin biosynthetic process3.42E-02
181GO:0030433: ubiquitin-dependent ERAD pathway3.65E-02
182GO:0006730: one-carbon metabolic process3.65E-02
183GO:0019748: secondary metabolic process3.65E-02
184GO:0010227: floral organ abscission3.88E-02
185GO:0006012: galactose metabolic process3.88E-02
186GO:0009693: ethylene biosynthetic process3.88E-02
187GO:0010584: pollen exine formation4.12E-02
188GO:0006096: glycolytic process4.17E-02
189GO:0009789: positive regulation of abscisic acid-activated signaling pathway4.36E-02
190GO:0042391: regulation of membrane potential4.61E-02
191GO:0010087: phloem or xylem histogenesis4.61E-02
192GO:0042631: cellular response to water deprivation4.61E-02
193GO:0006885: regulation of pH4.86E-02
RankGO TermAdjusted P value
1GO:0008777: acetylornithine deacetylase activity0.00E+00
2GO:0016504: peptidase activator activity0.00E+00
3GO:0016034: maleylacetoacetate isomerase activity0.00E+00
4GO:1990837: sequence-specific double-stranded DNA binding0.00E+00
5GO:0051670: inulinase activity0.00E+00
6GO:0070577: lysine-acetylated histone binding0.00E+00
7GO:0047720: indoleacetaldoxime dehydratase activity0.00E+00
8GO:0016312: inositol bisphosphate phosphatase activity0.00E+00
9GO:0016301: kinase activity1.69E-08
10GO:0004674: protein serine/threonine kinase activity8.21E-07
11GO:0005524: ATP binding1.64E-06
12GO:0005496: steroid binding4.56E-06
13GO:0016614: oxidoreductase activity, acting on CH-OH group of donors5.14E-06
14GO:0102391: decanoate--CoA ligase activity1.46E-05
15GO:0004467: long-chain fatty acid-CoA ligase activity2.29E-05
16GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity4.29E-05
17GO:0030145: manganese ion binding6.64E-05
18GO:0004351: glutamate decarboxylase activity9.12E-05
19GO:0008171: O-methyltransferase activity1.07E-04
20GO:0004364: glutathione transferase activity1.29E-04
21GO:0010279: indole-3-acetic acid amido synthetase activity1.57E-04
22GO:0015368: calcium:cation antiporter activity1.57E-04
23GO:0015369: calcium:proton antiporter activity1.57E-04
24GO:0050660: flavin adenine dinucleotide binding2.32E-04
25GO:0004970: ionotropic glutamate receptor activity2.76E-04
26GO:0005217: intracellular ligand-gated ion channel activity2.76E-04
27GO:0045735: nutrient reservoir activity3.54E-04
28GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity4.50E-04
29GO:0019707: protein-cysteine S-acyltransferase activity5.40E-04
30GO:0031219: levanase activity5.40E-04
31GO:0031957: very long-chain fatty acid-CoA ligase activity5.40E-04
32GO:0010285: L,L-diaminopimelate aminotransferase activity5.40E-04
33GO:0031127: alpha-(1,2)-fucosyltransferase activity5.40E-04
34GO:0051669: fructan beta-fructosidase activity5.40E-04
35GO:0004321: fatty-acyl-CoA synthase activity5.40E-04
36GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity5.40E-04
37GO:0005516: calmodulin binding6.70E-04
38GO:0015491: cation:cation antiporter activity7.18E-04
39GO:0009055: electron carrier activity7.93E-04
40GO:0019779: Atg8 activating enzyme activity1.16E-03
41GO:0042937: tripeptide transporter activity1.16E-03
42GO:0050736: O-malonyltransferase activity1.16E-03
43GO:0032454: histone demethylase activity (H3-K9 specific)1.16E-03
44GO:0004103: choline kinase activity1.16E-03
45GO:0004566: beta-glucuronidase activity1.16E-03
46GO:0050291: sphingosine N-acyltransferase activity1.16E-03
47GO:0004817: cysteine-tRNA ligase activity1.16E-03
48GO:0032934: sterol binding1.16E-03
49GO:0004061: arylformamidase activity1.16E-03
50GO:0030955: potassium ion binding1.23E-03
51GO:0004743: pyruvate kinase activity1.23E-03
52GO:0031683: G-protein beta/gamma-subunit complex binding1.91E-03
53GO:0004383: guanylate cyclase activity1.91E-03
54GO:0016805: dipeptidase activity1.91E-03
55GO:0016595: glutamate binding1.91E-03
56GO:0004478: methionine adenosyltransferase activity1.91E-03
57GO:0001664: G-protein coupled receptor binding1.91E-03
58GO:0042409: caffeoyl-CoA O-methyltransferase activity1.91E-03
59GO:0003955: NAD(P)H dehydrogenase (quinone) activity1.91E-03
60GO:0008757: S-adenosylmethionine-dependent methyltransferase activity2.48E-03
61GO:0008168: methyltransferase activity2.66E-03
62GO:0015181: arginine transmembrane transporter activity2.76E-03
63GO:0010178: IAA-amino acid conjugate hydrolase activity2.76E-03
64GO:0042299: lupeol synthase activity2.76E-03
65GO:0015189: L-lysine transmembrane transporter activity2.76E-03
66GO:0009916: alternative oxidase activity3.72E-03
67GO:0016866: intramolecular transferase activity3.72E-03
68GO:0050373: UDP-arabinose 4-epimerase activity3.72E-03
69GO:0042936: dipeptide transporter activity3.72E-03
70GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor3.72E-03
71GO:0070628: proteasome binding3.72E-03
72GO:0005313: L-glutamate transmembrane transporter activity3.72E-03
73GO:0004031: aldehyde oxidase activity3.72E-03
74GO:0050302: indole-3-acetaldehyde oxidase activity3.72E-03
75GO:0004040: amidase activity4.78E-03
76GO:0045431: flavonol synthase activity4.78E-03
77GO:0047714: galactolipase activity5.92E-03
78GO:0004012: phospholipid-translocating ATPase activity7.16E-03
79GO:0004602: glutathione peroxidase activity7.16E-03
80GO:0005261: cation channel activity7.16E-03
81GO:0004656: procollagen-proline 4-dioxygenase activity7.16E-03
82GO:0004723: calcium-dependent protein serine/threonine phosphatase activity7.16E-03
83GO:0003978: UDP-glucose 4-epimerase activity7.16E-03
84GO:0008113: peptide-methionine (S)-S-oxide reductase activity7.16E-03
85GO:0033743: peptide-methionine (R)-S-oxide reductase activity7.16E-03
86GO:0005085: guanyl-nucleotide exchange factor activity8.47E-03
87GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity8.47E-03
88GO:0008235: metalloexopeptidase activity8.47E-03
89GO:0004033: aldo-keto reductase (NADP) activity9.87E-03
90GO:0004714: transmembrane receptor protein tyrosine kinase activity9.87E-03
91GO:0052747: sinapyl alcohol dehydrogenase activity9.87E-03
92GO:0008237: metallopeptidase activity1.09E-02
93GO:0008142: oxysterol binding1.13E-02
94GO:0008970: phosphatidylcholine 1-acylhydrolase activity1.13E-02
95GO:0046872: metal ion binding1.20E-02
96GO:0008417: fucosyltransferase activity1.29E-02
97GO:0016207: 4-coumarate-CoA ligase activity1.29E-02
98GO:0071949: FAD binding1.29E-02
99GO:0030247: polysaccharide binding1.44E-02
100GO:0031490: chromatin DNA binding1.45E-02
101GO:0016844: strictosidine synthase activity1.45E-02
102GO:0015112: nitrate transmembrane transporter activity1.45E-02
103GO:0015174: basic amino acid transmembrane transporter activity1.45E-02
104GO:0004568: chitinase activity1.62E-02
105GO:0004713: protein tyrosine kinase activity1.62E-02
106GO:0030170: pyridoxal phosphate binding1.74E-02
107GO:0004177: aminopeptidase activity1.80E-02
108GO:0005543: phospholipid binding1.80E-02
109GO:0045551: cinnamyl-alcohol dehydrogenase activity1.98E-02
110GO:0000976: transcription regulatory region sequence-specific DNA binding1.98E-02
111GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors2.03E-02
112GO:0004675: transmembrane receptor protein serine/threonine kinase activity2.09E-02
113GO:0004871: signal transducer activity2.12E-02
114GO:0015266: protein channel activity2.17E-02
115GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism2.17E-02
116GO:0005262: calcium channel activity2.17E-02
117GO:0019888: protein phosphatase regulator activity2.17E-02
118GO:0015114: phosphate ion transmembrane transporter activity2.17E-02
119GO:0005388: calcium-transporting ATPase activity2.17E-02
120GO:0004022: alcohol dehydrogenase (NAD) activity2.17E-02
121GO:0004672: protein kinase activity2.47E-02
122GO:0004190: aspartic-type endopeptidase activity2.56E-02
123GO:0030552: cAMP binding2.56E-02
124GO:0030553: cGMP binding2.56E-02
125GO:0008061: chitin binding2.56E-02
126GO:0051537: 2 iron, 2 sulfur cluster binding2.84E-02
127GO:0001046: core promoter sequence-specific DNA binding2.98E-02
128GO:0031418: L-ascorbic acid binding2.98E-02
129GO:0003954: NADH dehydrogenase activity2.98E-02
130GO:0005216: ion channel activity3.20E-02
131GO:0019706: protein-cysteine S-palmitoyltransferase activity3.42E-02
132GO:0004707: MAP kinase activity3.42E-02
133GO:0000287: magnesium ion binding3.85E-02
134GO:0015171: amino acid transmembrane transporter activity3.91E-02
135GO:0004499: N,N-dimethylaniline monooxygenase activity4.12E-02
136GO:0043531: ADP binding4.41E-02
137GO:0005451: monovalent cation:proton antiporter activity4.61E-02
138GO:0005249: voltage-gated potassium channel activity4.61E-02
139GO:0030551: cyclic nucleotide binding4.61E-02
140GO:0005199: structural constituent of cell wall4.86E-02
RankGO TermAdjusted P value
1GO:0016021: integral component of membrane6.62E-11
2GO:0005886: plasma membrane9.22E-09
3GO:0000138: Golgi trans cisterna5.40E-04
4GO:0005783: endoplasmic reticulum5.91E-04
5GO:0005829: cytosol1.03E-03
6GO:0031304: intrinsic component of mitochondrial inner membrane1.16E-03
7GO:0009530: primary cell wall1.91E-03
8GO:0070062: extracellular exosome2.76E-03
9GO:0031461: cullin-RING ubiquitin ligase complex2.76E-03
10GO:0005746: mitochondrial respiratory chain4.78E-03
11GO:0032588: trans-Golgi network membrane5.92E-03
12GO:0005770: late endosome6.79E-03
13GO:0000794: condensed nuclear chromosome8.47E-03
14GO:0031305: integral component of mitochondrial inner membrane9.87E-03
15GO:0032580: Golgi cisterna membrane1.02E-02
16GO:0048046: apoplast1.70E-02
17GO:0005765: lysosomal membrane1.80E-02
18GO:0005576: extracellular region1.85E-02
19GO:0005794: Golgi apparatus2.04E-02
20GO:0009705: plant-type vacuole membrane2.29E-02
21GO:0005795: Golgi stack2.56E-02
22GO:0005769: early endosome2.77E-02
23GO:0070469: respiratory chain3.20E-02
24GO:0005839: proteasome core complex3.42E-02
25GO:0005744: mitochondrial inner membrane presequence translocase complex4.12E-02
26GO:0005834: heterotrimeric G-protein complex4.44E-02
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Gene type



Gene DE type