Gene: AT1G32540
     


Gene description


TAIR ID: AT1G32540

Short description: lsd one like 1

Pathogen responsiveness: -0.33

General responsiveness: 1.62

Orthologous


Rice:

OS08G0159500  

Maize:

GRMZM2G055135  

Wheat: No orthologous gene

GO biological process


positive regulation of programmed cell death, plant-type hypersensitive response, defense response, incompatible interaction, regulation of removal of superoxide radicals, positive regulation of plant-type hypersensitive response


GO cellular component


extracellular region, integral component of membrane, nucleus


GO molecular function


unkown


Protein domain


PfamPF06943, LSD1 zinc finger

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT1G51600, AT5G13790, AT3G27920, AT5G61850, AT2G43010

Target:
AT1G08830

Protein-protein interaction network


The number of partners (degree) is: 2

click to view PPI network

Differentially expressed condition


11 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE13739Col, WT, control 0 hCol, WT, G.orontii 6 h-2.532.88E-09
GSE13739Col, eds, control 0 hCol, eds, G.orontii 6 h-2.562.13E-09
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h-1.555.15E-05
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-2.663.15E-15
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-2.391.82E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-2.174.26E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-2.741.90E-15
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-2.061.66E-12
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h-1.577.16E-07
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-2.433.44E-05
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h-1.871.39E-03






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