Gene: AT1G30330
     

Gene description


TAIR ID: AT1G30330

Short description: auxin response factor 6

Pathogen responsiveness: -2.45

General responsiveness: -2.22

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G028980  

Wheat:

TA.6394.1.A1_AT  


GO biological process


regulation of transcription, DNA-templated, transcription, flower development, auxin-activated signaling pathway, response to auxin


GO cellular component


nucleus


GO molecular function


protein binding, DNA binding, transcription factor activity, sequence-specific DNA binding


Protein domain


PfamPF02309, AUX/IAA family
PfamPF06507, Auxin response factor
PfamPF02362, B3 DNA binding domain
SMARTSM01019, B3

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT1G24260, AT2G43010, AT4G36990

Target:
AT2G44810

Protein-protein interaction network


The number of partners (degree) is: 44 (Top5%)

click to view PPI network

Differentially expressed condition


2 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h1.505.87E-09
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-1.987.57E-03






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