gene detail

Gene description

TAIR ID: AT1G29530

No short description

Pathogen responsiveness: 0.06

General responsiveness: -0.87

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

biological_process

GO cellular component

nucleus

GO molecular function

molecular_function

Protein domain

No domain annotation

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G61850

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE26679_WT_GC  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

23 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE12856	Col, ataf1, control	Col, ataf1, Bg h	-1.68	1.33E-07
GSE17464	Laer, control	Laer, Flg22 2 h	-1.58	3.47E-05
GSE17464	Penta, control	Penta, Flg22 2 h	-1.55	3.26E-05
GSE17464	Penta, control	Penta, Flg22 2 h	-1.55	3.95E-05
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	-1.67	1.17E-04
GSE17500	Col, miR393, control 0 h	Col, miR393, PstDC3000 24 h	-1.87	6.40E-05
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-2.67	2.04E-09
GSE21920	Col, WT, mock	Col, WT, Pto HopZ1a 6 h	-1.51	6.50E-07
GSE40544	Col, WT, control	Col, WT, PstDC3000 AvrRpt2	-1.82	3.75E-05
GSE40544	Col, WT, control	Col, WT, PstDC3000 EV	-2.21	4.31E-06
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 AvrRpt2	-1.98	1.73E-05
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	-3.38	7.41E-14
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	-2.32	2.05E-11
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	-2.43	8.58E-12
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-2.23	3.45E-11
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	-3.12	2.07E-13
GSE45214	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-1.61	5.96E-09
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	-2.49	3.55E-12
GSE50526	Col, WT, mock 9 h	Col, WT, A. brassicicola 9 h	-1.68	5.13E-04
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	-1.53	4.29E-05
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	-1.90	1.75E-03
GSE9674	Ws-4, AtMYB30 ox, control	Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h	-1.64	5.68E-03
GSE9674	Ws-4, WT, control	Ws-4, WT, Xanthomonas strain Xcc147 6 h	-1.53	9.78E-03