Gene: AT1G27050
     

Gene description


TAIR ID: AT1G27050

Short description: homeobox protein 54

Pathogen responsiveness: -1.64

General responsiveness: -2.50

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


regulation of transcription, DNA-templated


GO cellular component


nucleus


GO molecular function


transcription factor activity, sequence-specific DNA binding


Protein domain


PfamPF00076, RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
SMARTSM00360, RRM

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT1G13450, AT5G13790, AT1G24260, AT2G43010

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Coexpression network

GSE56094_WT_PSTDC3000  view

Differentially expressed condition


3 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-2.198.11E-10
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-2.513.24E-03
GSE37269St0, WT, controlSt0, WT, TEV 21 d-2.912.86E-04






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