Gene: AT1G25560
     

Gene description


TAIR ID: AT1G25560

Short description: AP2/B3 transcription factor family protein

Pathogen responsiveness: -0.27

General responsiveness: -0.05

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


photoperiodism, flowering, ethylene-activated signaling pathway, transcription, DNA-templated, regulation of transcription


GO cellular component


nucleus


GO molecular function


protein binding, transcription factor activity, sequence-specific DNA binding


Protein domain


PfamPF02362, B3 DNA binding domain
PfamPF00847, AP2 domain
SMARTSM01019, B3
SMARTSM00380, AP2

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT1G24260, AT5G61850, AT4G36990

Target:
AT1G65480

Protein-protein interaction network


The number of partners (degree) is: 5

click to view PPI network

Differentially expressed condition


23 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE13739Col, WT, control 0 hCol, WT, G.orontii 6 h1.985.98E-05
GSE13739Col, eds, control 0 hCol, eds, G.orontii 6 h2.431.68E-06
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h1.521.50E-04
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h1.512.19E-04
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h1.922.92E-07
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h1.666.53E-08
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h1.732.65E-08
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h1.665.57E-08
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h2.134.03E-10
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-2.093.99E-03
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.671.31E-02
GSE40544Col, WT, controlCol, WT, PstDC3000 EV1.841.77E-03
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h1.951.20E-10
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h2.207.96E-11
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h1.757.38E-10
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h1.583.04E-09
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h2.367.06E-12
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h1.736.45E-09
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h2.245.37E-11
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h1.651.61E-08
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h1.966.94E-09
GSE6556Col, gh3.5, controlCol, gh3.5, PstDC3000 AvrRpt2 48 h1.805.63E-05
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 2-4 h1.681.84E-02






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