Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G25560

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006971: hypotonic response0.00E+00
2GO:0034484: raffinose catabolic process0.00E+00
3GO:0006792: regulation of sulfur utilization0.00E+00
4GO:0010200: response to chitin4.21E-11
5GO:0010438: cellular response to sulfur starvation6.60E-09
6GO:0030162: regulation of proteolysis6.00E-08
7GO:0009611: response to wounding1.40E-06
8GO:2000022: regulation of jasmonic acid mediated signaling pathway2.04E-06
9GO:0009751: response to salicylic acid5.59E-06
10GO:0010439: regulation of glucosinolate biosynthetic process1.36E-05
11GO:0042542: response to hydrogen peroxide3.72E-05
12GO:0050691: regulation of defense response to virus by host4.04E-05
13GO:0051973: positive regulation of telomerase activity4.04E-05
14GO:0080164: regulation of nitric oxide metabolic process4.04E-05
15GO:0055063: sulfate ion homeostasis4.04E-05
16GO:0046500: S-adenosylmethionine metabolic process4.04E-05
17GO:0031347: regulation of defense response5.34E-05
18GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process5.34E-05
19GO:0051592: response to calcium ion1.00E-04
20GO:0080185: effector dependent induction by symbiont of host immune response1.00E-04
21GO:2000693: positive regulation of seed maturation1.00E-04
22GO:0019419: sulfate reduction1.73E-04
23GO:0006556: S-adenosylmethionine biosynthetic process1.73E-04
24GO:0080168: abscisic acid transport1.73E-04
25GO:0009741: response to brassinosteroid1.95E-04
26GO:0009409: response to cold2.05E-04
27GO:0009743: response to carbohydrate2.55E-04
28GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process2.67E-04
29GO:0045893: positive regulation of transcription, DNA-templated3.17E-04
30GO:0045927: positive regulation of growth4.37E-04
31GO:0006544: glycine metabolic process4.37E-04
32GO:0006355: regulation of transcription, DNA-templated4.59E-04
33GO:0006563: L-serine metabolic process5.37E-04
34GO:0006555: methionine metabolic process5.37E-04
35GO:0009267: cellular response to starvation5.37E-04
36GO:0047484: regulation of response to osmotic stress5.37E-04
37GO:0009612: response to mechanical stimulus6.40E-04
38GO:0010038: response to metal ion7.49E-04
39GO:2000070: regulation of response to water deprivation8.61E-04
40GO:0035265: organ growth8.61E-04
41GO:0009733: response to auxin9.02E-04
42GO:0009753: response to jasmonic acid9.47E-04
43GO:0044030: regulation of DNA methylation9.77E-04
44GO:2000031: regulation of salicylic acid mediated signaling pathway9.77E-04
45GO:0048574: long-day photoperiodism, flowering9.77E-04
46GO:0010120: camalexin biosynthetic process9.77E-04
47GO:0009651: response to salt stress1.06E-03
48GO:0009873: ethylene-activated signaling pathway1.19E-03
49GO:0035999: tetrahydrofolate interconversion1.22E-03
50GO:0000103: sulfate assimilation1.35E-03
51GO:1903507: negative regulation of nucleic acid-templated transcription1.49E-03
52GO:0010015: root morphogenesis1.49E-03
53GO:0002237: response to molecule of bacterial origin1.92E-03
54GO:0010167: response to nitrate2.07E-03
55GO:0007623: circadian rhythm2.32E-03
56GO:0009737: response to abscisic acid2.36E-03
57GO:0019344: cysteine biosynthetic process2.39E-03
58GO:0006730: one-carbon metabolic process2.89E-03
59GO:0040007: growth3.06E-03
60GO:0001944: vasculature development3.06E-03
61GO:0009693: ethylene biosynthetic process3.06E-03
62GO:0019722: calcium-mediated signaling3.24E-03
63GO:0009658: chloroplast organization3.57E-03
64GO:0010182: sugar mediated signaling pathway3.80E-03
65GO:0009646: response to absence of light3.99E-03
66GO:0009723: response to ethylene4.12E-03
67GO:0042742: defense response to bacterium4.30E-03
68GO:0002229: defense response to oomycetes4.38E-03
69GO:0030154: cell differentiation4.79E-03
70GO:0007267: cell-cell signaling5.21E-03
71GO:0045454: cell redox homeostasis5.28E-03
72GO:0001666: response to hypoxia5.64E-03
73GO:0009816: defense response to bacterium, incompatible interaction5.86E-03
74GO:0009627: systemic acquired resistance6.09E-03
75GO:0010411: xyloglucan metabolic process6.31E-03
76GO:0016049: cell growth6.54E-03
77GO:0009817: defense response to fungus, incompatible interaction6.77E-03
78GO:0048527: lateral root development7.49E-03
79GO:0045087: innate immune response7.99E-03
80GO:0006351: transcription, DNA-templated8.42E-03
81GO:0006357: regulation of transcription from RNA polymerase II promoter8.61E-03
82GO:0042546: cell wall biogenesis9.80E-03
83GO:0006855: drug transmembrane transport1.06E-02
84GO:0009738: abscisic acid-activated signaling pathway1.12E-02
85GO:0009809: lignin biosynthetic process1.18E-02
86GO:0009909: regulation of flower development1.26E-02
87GO:0009620: response to fungus1.41E-02
88GO:0009553: embryo sac development1.48E-02
89GO:0009742: brassinosteroid mediated signaling pathway1.57E-02
90GO:0050832: defense response to fungus1.71E-02
91GO:0009845: seed germination1.87E-02
92GO:0006413: translational initiation2.12E-02
93GO:0010150: leaf senescence2.22E-02
94GO:0009414: response to water deprivation2.29E-02
95GO:0009739: response to gibberellin2.41E-02
96GO:0006970: response to osmotic stress3.20E-02
97GO:0080167: response to karrikin3.54E-02
98GO:0046686: response to cadmium ion3.65E-02
99GO:0046777: protein autophosphorylation3.71E-02
100GO:0006952: defense response3.74E-02
101GO:0006629: lipid metabolic process4.67E-02
102GO:0009408: response to heat4.67E-02
103GO:0007165: signal transduction4.86E-02
RankGO TermAdjusted P value
1GO:0030295: protein kinase activator activity4.04E-05
2GO:1901149: salicylic acid binding4.04E-05
3GO:0090440: abscisic acid transporter activity4.04E-05
4GO:0003712: transcription cofactor activity7.15E-05
5GO:0031625: ubiquitin protein ligase binding7.33E-05
6GO:0033741: adenylyl-sulfate reductase (glutathione) activity1.00E-04
7GO:0009973: adenylyl-sulfate reductase activity1.00E-04
8GO:0004604: phosphoadenylyl-sulfate reductase (thioredoxin) activity1.00E-04
9GO:0004478: methionine adenosyltransferase activity1.73E-04
10GO:0052692: raffinose alpha-galactosidase activity1.73E-04
11GO:0004402: histone acetyltransferase activity1.79E-04
12GO:0003700: transcription factor activity, sequence-specific DNA binding3.40E-04
13GO:0004372: glycine hydroxymethyltransferase activity4.37E-04
14GO:0004708: MAP kinase kinase activity8.61E-04
15GO:0008271: secondary active sulfate transmembrane transporter activity9.77E-04
16GO:0015116: sulfate transmembrane transporter activity1.63E-03
17GO:0043565: sequence-specific DNA binding2.21E-03
18GO:0003714: transcription corepressor activity2.39E-03
19GO:0001085: RNA polymerase II transcription factor binding3.80E-03
20GO:0044212: transcription regulatory region DNA binding4.30E-03
21GO:0016762: xyloglucan:xyloglucosyl transferase activity4.38E-03
22GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity5.21E-03
23GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting5.28E-03
24GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding5.87E-03
25GO:0016798: hydrolase activity, acting on glycosyl bonds6.31E-03
26GO:0004806: triglyceride lipase activity6.31E-03
27GO:0015238: drug transmembrane transporter activity7.01E-03
28GO:0005515: protein binding7.23E-03
29GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding7.49E-03
30GO:0051539: 4 iron, 4 sulfur cluster binding8.75E-03
31GO:0015293: symporter activity1.03E-02
32GO:0045735: nutrient reservoir activity1.32E-02
33GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds1.53E-02
34GO:0005516: calmodulin binding1.74E-02
35GO:0030170: pyridoxal phosphate binding1.91E-02
36GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding1.94E-02
37GO:0015297: antiporter activity2.15E-02
38GO:0003743: translation initiation factor activity2.48E-02
39GO:0042802: identical protein binding2.64E-02
40GO:0003677: DNA binding2.86E-02
41GO:0046982: protein heterodimerization activity2.99E-02
42GO:0003682: chromatin binding3.16E-02
43GO:0043531: ADP binding3.24E-02
44GO:0004871: signal transducer activity4.16E-02
RankGO TermAdjusted P value
1GO:0090568: nuclear transcriptional repressor complex0.00E+00
2GO:0019005: SCF ubiquitin ligase complex1.80E-05
3GO:0005615: extracellular space2.60E-03
4GO:0015629: actin cytoskeleton3.06E-03
5GO:0005770: late endosome3.80E-03
6GO:0048046: apoplast5.31E-03
7GO:0005667: transcription factor complex6.09E-03
8GO:0031902: late endosome membrane9.01E-03
9GO:0090406: pollen tube9.53E-03
10GO:0005634: nucleus2.27E-02
11GO:0005618: cell wall2.46E-02
12GO:0009505: plant-type cell wall2.94E-02
13GO:0031969: chloroplast membrane3.54E-02
14GO:0009506: plasmodesma3.67E-02
Gene type



Gene DE type