Gene: AT1G22590
     

Gene description


TAIR ID: AT1G22590

Short description: AGAMOUS-like 87

Pathogen responsiveness: -0.13

General responsiveness: 1.73

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


regulation of transcription, DNA-templated, positive regulation of transcription from RNA polymerase II promoter


GO cellular component


nucleus


GO molecular function


core promoter proximal region sequence-specific DNA binding, transcription factor activity, sequence-specific DNA binding, RNA polymerase II core promoter proximal region sequence-specific binding, protein dimerization activity


Protein domain


PfamPF00319, SRF-type transcription factor (DNA-binding and dimerisation domain)
SMARTSM00432, MADS

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT4G31800

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 2

click to view PPI network

Differentially expressed condition


24 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE12856Col, ataf1, controlCol, ataf1, Bg h-1.722.83E-07
GSE13739Col, WT, control 7 dCol, WT, G.orontii 7 d-1.561.45E-05
GSE17464Laer, JA+Flg22 0 hLaer, JA+Flg22 2 h-1.531.95E-02
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h-1.892.10E-04
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h-2.213.38E-05
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h-2.244.73E-05
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-3.022.05E-10
GSE20278Col, RPL18-HF, control, polysomal RNACol, RPL18-HF, TuMV 10 d, polysomal RNA-2.062.39E-04
GSE20278Col, RPL18-HF, controlCol, RPL18-HF, TuMV 10 d-1.686.29E-04
GSE21920Col, WT, mockCol, WT, Pto HopZ1a 6 h-1.697.66E-09
GSE37269St0, WT, controlSt0, WT, TEV 21 d-2.003.90E-04
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-1.892.94E-10
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-1.932.34E-10
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-1.941.95E-10
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-1.736.02E-11
GSE50526Col, WT, mock 24 hCol, WT, A. brassicicola 24 h-1.783.75E-03
GSE50526Col, WT, mock 9 hCol, WT, A. brassicicola 9 h-1.545.44E-03
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-2.008.07E-04
GSE5520Col, WT, control 24 hCol, WT, PstDC3000 24 h-1.591.35E-02
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h-1.521.86E-03
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-1.537.00E-03
GSE6556Col, gh3.5, controlCol, gh3.5, PstDC3000 AvrRpt2 48 h-1.942.69E-05
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h-1.522.21E-02
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h-1.701.41E-02






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