GO Enrichment Analysis of Co-expressed Genes with
AT1G22590
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0015882: L-ascorbic acid transport | 0.00E+00 |
2 | GO:0006399: tRNA metabolic process | 0.00E+00 |
3 | GO:0006437: tyrosyl-tRNA aminoacylation | 0.00E+00 |
4 | GO:0070125: mitochondrial translational elongation | 0.00E+00 |
5 | GO:0006671: phytosphingosine metabolic process | 0.00E+00 |
6 | GO:0006428: isoleucyl-tRNA aminoacylation | 0.00E+00 |
7 | GO:0006642: triglyceride mobilization | 0.00E+00 |
8 | GO:0051503: adenine nucleotide transport | 0.00E+00 |
9 | GO:0070272: proton-transporting ATP synthase complex biogenesis | 0.00E+00 |
10 | GO:0006418: tRNA aminoacylation for protein translation | 2.42E-06 |
11 | GO:0010270: photosystem II oxygen evolving complex assembly | 2.65E-06 |
12 | GO:0006695: cholesterol biosynthetic process | 2.65E-06 |
13 | GO:0009658: chloroplast organization | 4.35E-06 |
14 | GO:0019253: reductive pentose-phosphate cycle | 3.98E-05 |
15 | GO:0015976: carbon utilization | 3.99E-05 |
16 | GO:0046166: glyceraldehyde-3-phosphate biosynthetic process | 2.39E-04 |
17 | GO:0010028: xanthophyll cycle | 2.39E-04 |
18 | GO:0006430: lysyl-tRNA aminoacylation | 2.39E-04 |
19 | GO:0006427: histidyl-tRNA aminoacylation | 2.39E-04 |
20 | GO:0009657: plastid organization | 2.67E-04 |
21 | GO:0071482: cellular response to light stimulus | 2.67E-04 |
22 | GO:0033384: geranyl diphosphate biosynthetic process | 3.23E-04 |
23 | GO:0045337: farnesyl diphosphate biosynthetic process | 3.23E-04 |
24 | GO:0010027: thylakoid membrane organization | 4.11E-04 |
25 | GO:0009073: aromatic amino acid family biosynthetic process | 5.19E-04 |
26 | GO:0006415: translational termination | 5.19E-04 |
27 | GO:0006352: DNA-templated transcription, initiation | 5.19E-04 |
28 | GO:0006650: glycerophospholipid metabolic process | 5.29E-04 |
29 | GO:0018022: peptidyl-lysine methylation | 5.29E-04 |
30 | GO:0006568: tryptophan metabolic process | 5.29E-04 |
31 | GO:0043039: tRNA aminoacylation | 5.29E-04 |
32 | GO:0048481: plant ovule development | 5.78E-04 |
33 | GO:0010207: photosystem II assembly | 7.56E-04 |
34 | GO:0010020: chloroplast fission | 7.56E-04 |
35 | GO:0090351: seedling development | 8.45E-04 |
36 | GO:0019563: glycerol catabolic process | 8.60E-04 |
37 | GO:0006518: peptide metabolic process | 8.60E-04 |
38 | GO:0006433: prolyl-tRNA aminoacylation | 8.60E-04 |
39 | GO:0006696: ergosterol biosynthetic process | 8.60E-04 |
40 | GO:0032504: multicellular organism reproduction | 8.60E-04 |
41 | GO:0010581: regulation of starch biosynthetic process | 8.60E-04 |
42 | GO:0006228: UTP biosynthetic process | 1.23E-03 |
43 | GO:0016556: mRNA modification | 1.23E-03 |
44 | GO:2001141: regulation of RNA biosynthetic process | 1.23E-03 |
45 | GO:0006241: CTP biosynthetic process | 1.23E-03 |
46 | GO:0046902: regulation of mitochondrial membrane permeability | 1.23E-03 |
47 | GO:0033014: tetrapyrrole biosynthetic process | 1.23E-03 |
48 | GO:0006165: nucleoside diphosphate phosphorylation | 1.23E-03 |
49 | GO:0061077: chaperone-mediated protein folding | 1.25E-03 |
50 | GO:0006730: one-carbon metabolic process | 1.36E-03 |
51 | GO:0051567: histone H3-K9 methylation | 1.64E-03 |
52 | GO:0006546: glycine catabolic process | 1.64E-03 |
53 | GO:0071483: cellular response to blue light | 1.64E-03 |
54 | GO:0010037: response to carbon dioxide | 1.64E-03 |
55 | GO:0006808: regulation of nitrogen utilization | 1.64E-03 |
56 | GO:0010109: regulation of photosynthesis | 1.64E-03 |
57 | GO:0006085: acetyl-CoA biosynthetic process | 1.64E-03 |
58 | GO:0006183: GTP biosynthetic process | 1.64E-03 |
59 | GO:2000122: negative regulation of stomatal complex development | 1.64E-03 |
60 | GO:0016117: carotenoid biosynthetic process | 1.75E-03 |
61 | GO:0006096: glycolytic process | 1.91E-03 |
62 | GO:0031365: N-terminal protein amino acid modification | 2.09E-03 |
63 | GO:0009247: glycolipid biosynthetic process | 2.09E-03 |
64 | GO:0006796: phosphate-containing compound metabolic process | 2.57E-03 |
65 | GO:0010190: cytochrome b6f complex assembly | 2.57E-03 |
66 | GO:0042549: photosystem II stabilization | 2.57E-03 |
67 | GO:0006555: methionine metabolic process | 2.57E-03 |
68 | GO:0016554: cytidine to uridine editing | 2.57E-03 |
69 | GO:0006828: manganese ion transport | 2.57E-03 |
70 | GO:0015979: photosynthesis | 2.89E-03 |
71 | GO:0006458: 'de novo' protein folding | 3.09E-03 |
72 | GO:0009854: oxidative photosynthetic carbon pathway | 3.09E-03 |
73 | GO:0042026: protein refolding | 3.09E-03 |
74 | GO:0009645: response to low light intensity stimulus | 3.64E-03 |
75 | GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway | 3.64E-03 |
76 | GO:0019375: galactolipid biosynthetic process | 4.23E-03 |
77 | GO:0000105: histidine biosynthetic process | 4.23E-03 |
78 | GO:0007155: cell adhesion | 4.23E-03 |
79 | GO:0032544: plastid translation | 4.84E-03 |
80 | GO:0019430: removal of superoxide radicals | 4.84E-03 |
81 | GO:0006783: heme biosynthetic process | 5.48E-03 |
82 | GO:0098656: anion transmembrane transport | 5.48E-03 |
83 | GO:0009051: pentose-phosphate shunt, oxidative branch | 5.48E-03 |
84 | GO:0006810: transport | 5.71E-03 |
85 | GO:0009853: photorespiration | 5.96E-03 |
86 | GO:0016571: histone methylation | 6.15E-03 |
87 | GO:0006779: porphyrin-containing compound biosynthetic process | 6.15E-03 |
88 | GO:0035999: tetrahydrofolate interconversion | 6.15E-03 |
89 | GO:1900865: chloroplast RNA modification | 6.15E-03 |
90 | GO:0042761: very long-chain fatty acid biosynthetic process | 6.15E-03 |
91 | GO:0010380: regulation of chlorophyll biosynthetic process | 6.15E-03 |
92 | GO:0046686: response to cadmium ion | 6.41E-03 |
93 | GO:0006535: cysteine biosynthetic process from serine | 6.85E-03 |
94 | GO:0006631: fatty acid metabolic process | 7.08E-03 |
95 | GO:0043085: positive regulation of catalytic activity | 7.58E-03 |
96 | GO:0018119: peptidyl-cysteine S-nitrosylation | 7.58E-03 |
97 | GO:0010216: maintenance of DNA methylation | 7.58E-03 |
98 | GO:0006816: calcium ion transport | 7.58E-03 |
99 | GO:0009773: photosynthetic electron transport in photosystem I | 7.58E-03 |
100 | GO:0006790: sulfur compound metabolic process | 8.33E-03 |
101 | GO:0006006: glucose metabolic process | 9.11E-03 |
102 | GO:0006094: gluconeogenesis | 9.11E-03 |
103 | GO:0009767: photosynthetic electron transport chain | 9.11E-03 |
104 | GO:0046854: phosphatidylinositol phosphorylation | 1.07E-02 |
105 | GO:0051603: proteolysis involved in cellular protein catabolic process | 1.07E-02 |
106 | GO:0010025: wax biosynthetic process | 1.16E-02 |
107 | GO:0000162: tryptophan biosynthetic process | 1.16E-02 |
108 | GO:0019344: cysteine biosynthetic process | 1.25E-02 |
109 | GO:0048316: seed development | 1.27E-02 |
110 | GO:0007017: microtubule-based process | 1.34E-02 |
111 | GO:0009768: photosynthesis, light harvesting in photosystem I | 1.34E-02 |
112 | GO:0008299: isoprenoid biosynthetic process | 1.34E-02 |
113 | GO:0045454: cell redox homeostasis | 1.40E-02 |
114 | GO:0080092: regulation of pollen tube growth | 1.53E-02 |
115 | GO:0009409: response to cold | 1.53E-02 |
116 | GO:0009411: response to UV | 1.62E-02 |
117 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 1.62E-02 |
118 | GO:0019722: calcium-mediated signaling | 1.72E-02 |
119 | GO:0042335: cuticle development | 1.93E-02 |
120 | GO:0000271: polysaccharide biosynthetic process | 1.93E-02 |
121 | GO:0080022: primary root development | 1.93E-02 |
122 | GO:0045489: pectin biosynthetic process | 2.03E-02 |
123 | GO:0007018: microtubule-based movement | 2.14E-02 |
124 | GO:0008654: phospholipid biosynthetic process | 2.25E-02 |
125 | GO:0006508: proteolysis | 2.36E-02 |
126 | GO:0010583: response to cyclopentenone | 2.47E-02 |
127 | GO:0009828: plant-type cell wall loosening | 2.71E-02 |
128 | GO:0007267: cell-cell signaling | 2.83E-02 |
129 | GO:0071805: potassium ion transmembrane transport | 2.83E-02 |
130 | GO:0042128: nitrate assimilation | 3.32E-02 |
131 | GO:0018298: protein-chromophore linkage | 3.71E-02 |
132 | GO:0042254: ribosome biogenesis | 4.03E-02 |
133 | GO:0010119: regulation of stomatal movement | 4.11E-02 |
134 | GO:0016051: carbohydrate biosynthetic process | 4.39E-02 |
135 | GO:0009637: response to blue light | 4.39E-02 |
136 | GO:0006839: mitochondrial transport | 4.81E-02 |
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0008887: glycerate kinase activity | 0.00E+00 |
2 | GO:0004822: isoleucine-tRNA ligase activity | 0.00E+00 |
3 | GO:0046905: phytoene synthase activity | 0.00E+00 |
4 | GO:0015229: L-ascorbic acid transporter activity | 0.00E+00 |
5 | GO:0008942: nitrite reductase [NAD(P)H] activity | 0.00E+00 |
6 | GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity | 0.00E+00 |
7 | GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity | 0.00E+00 |
8 | GO:0046974: histone methyltransferase activity (H3-K9 specific) | 0.00E+00 |
9 | GO:0009974: zeinoxanthin epsilon hydroxylase activity | 0.00E+00 |
10 | GO:0004812: aminoacyl-tRNA ligase activity | 6.49E-06 |
11 | GO:0016149: translation release factor activity, codon specific | 2.19E-05 |
12 | GO:0001053: plastid sigma factor activity | 3.99E-05 |
13 | GO:0016987: sigma factor activity | 3.99E-05 |
14 | GO:0005528: FK506 binding | 6.71E-05 |
15 | GO:0051920: peroxiredoxin activity | 1.29E-04 |
16 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.68E-04 |
17 | GO:0016209: antioxidant activity | 2.16E-04 |
18 | GO:0004325: ferrochelatase activity | 2.39E-04 |
19 | GO:0004821: histidine-tRNA ligase activity | 2.39E-04 |
20 | GO:0051996: squalene synthase activity | 2.39E-04 |
21 | GO:0004489: methylenetetrahydrofolate reductase (NAD(P)H) activity | 2.39E-04 |
22 | GO:0047381: dodecanoyl-[acyl-carrier-protein] hydrolase activity | 2.39E-04 |
23 | GO:0046912: transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer | 2.39E-04 |
24 | GO:0004425: indole-3-glycerol-phosphate synthase activity | 2.39E-04 |
25 | GO:0004824: lysine-tRNA ligase activity | 2.39E-04 |
26 | GO:0004807: triose-phosphate isomerase activity | 2.39E-04 |
27 | GO:0004831: tyrosine-tRNA ligase activity | 2.39E-04 |
28 | GO:0003747: translation release factor activity | 3.23E-04 |
29 | GO:0004337: geranyltranstransferase activity | 3.23E-04 |
30 | GO:0004161: dimethylallyltranstransferase activity | 5.19E-04 |
31 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 5.29E-04 |
32 | GO:0004310: farnesyl-diphosphate farnesyltransferase activity | 5.29E-04 |
33 | GO:0050017: L-3-cyanoalanine synthase activity | 5.29E-04 |
34 | GO:0004618: phosphoglycerate kinase activity | 5.29E-04 |
35 | GO:0004326: tetrahydrofolylpolyglutamate synthase activity | 5.29E-04 |
36 | GO:0004047: aminomethyltransferase activity | 5.29E-04 |
37 | GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity | 5.29E-04 |
38 | GO:0004089: carbonate dehydratase activity | 6.71E-04 |
39 | GO:0031072: heat shock protein binding | 6.71E-04 |
40 | GO:0030267: glyoxylate reductase (NADP) activity | 8.60E-04 |
41 | GO:0010429: methyl-CpNpN binding | 8.60E-04 |
42 | GO:0016296: palmitoyl-[acyl-carrier-protein] hydrolase activity | 8.60E-04 |
43 | GO:0016295: myristoyl-[acyl-carrier-protein] hydrolase activity | 8.60E-04 |
44 | GO:0017050: D-erythro-sphingosine kinase activity | 8.60E-04 |
45 | GO:0004827: proline-tRNA ligase activity | 8.60E-04 |
46 | GO:0070330: aromatase activity | 8.60E-04 |
47 | GO:0017150: tRNA dihydrouridine synthase activity | 8.60E-04 |
48 | GO:0010428: methyl-CpNpG binding | 8.60E-04 |
49 | GO:0002161: aminoacyl-tRNA editing activity | 8.60E-04 |
50 | GO:0004148: dihydrolipoyl dehydrogenase activity | 8.60E-04 |
51 | GO:0035250: UDP-galactosyltransferase activity | 1.23E-03 |
52 | GO:0004550: nucleoside diphosphate kinase activity | 1.23E-03 |
53 | GO:0017057: 6-phosphogluconolactonase activity | 1.23E-03 |
54 | GO:0008097: 5S rRNA binding | 1.23E-03 |
55 | GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity | 1.23E-03 |
56 | GO:0003878: ATP citrate synthase activity | 1.23E-03 |
57 | GO:0004659: prenyltransferase activity | 1.64E-03 |
58 | GO:0005319: lipid transporter activity | 1.64E-03 |
59 | GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed | 1.64E-03 |
60 | GO:0004045: aminoacyl-tRNA hydrolase activity | 1.64E-03 |
61 | GO:0010385: double-stranded methylated DNA binding | 1.64E-03 |
62 | GO:0018685: alkane 1-monooxygenase activity | 2.09E-03 |
63 | GO:0005471: ATP:ADP antiporter activity | 2.09E-03 |
64 | GO:0008374: O-acyltransferase activity | 2.09E-03 |
65 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 2.09E-03 |
66 | GO:0051082: unfolded protein binding | 2.42E-03 |
67 | GO:0016462: pyrophosphatase activity | 2.57E-03 |
68 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 3.09E-03 |
69 | GO:0004124: cysteine synthase activity | 3.09E-03 |
70 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 3.09E-03 |
71 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 3.09E-03 |
72 | GO:0102391: decanoate--CoA ligase activity | 3.09E-03 |
73 | GO:0004467: long-chain fatty acid-CoA ligase activity | 3.64E-03 |
74 | GO:0004143: diacylglycerol kinase activity | 3.64E-03 |
75 | GO:0016831: carboxy-lyase activity | 3.64E-03 |
76 | GO:0008235: metalloexopeptidase activity | 3.64E-03 |
77 | GO:0004427: inorganic diphosphatase activity | 3.64E-03 |
78 | GO:0004033: aldo-keto reductase (NADP) activity | 4.23E-03 |
79 | GO:0003951: NAD+ kinase activity | 4.84E-03 |
80 | GO:0005384: manganese ion transmembrane transporter activity | 6.15E-03 |
81 | GO:0047617: acyl-CoA hydrolase activity | 6.15E-03 |
82 | GO:0008047: enzyme activator activity | 6.85E-03 |
83 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 7.58E-03 |
84 | GO:0008327: methyl-CpG binding | 7.58E-03 |
85 | GO:0004177: aminopeptidase activity | 7.58E-03 |
86 | GO:0044183: protein binding involved in protein folding | 7.58E-03 |
87 | GO:0004185: serine-type carboxypeptidase activity | 7.68E-03 |
88 | GO:0051537: 2 iron, 2 sulfur cluster binding | 8.31E-03 |
89 | GO:0000049: tRNA binding | 8.33E-03 |
90 | GO:0005315: inorganic phosphate transmembrane transporter activity | 9.11E-03 |
91 | GO:0015095: magnesium ion transmembrane transporter activity | 9.11E-03 |
92 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.04E-02 |
93 | GO:0031409: pigment binding | 1.16E-02 |
94 | GO:0004857: enzyme inhibitor activity | 1.25E-02 |
95 | GO:0015079: potassium ion transmembrane transporter activity | 1.34E-02 |
96 | GO:0019706: protein-cysteine S-palmitoyltransferase activity | 1.43E-02 |
97 | GO:0016746: transferase activity, transferring acyl groups | 1.52E-02 |
98 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 1.53E-02 |
99 | GO:0008514: organic anion transmembrane transporter activity | 1.72E-02 |
100 | GO:0003756: protein disulfide isomerase activity | 1.72E-02 |
101 | GO:0003729: mRNA binding | 1.80E-02 |
102 | GO:0003924: GTPase activity | 1.82E-02 |
103 | GO:0019843: rRNA binding | 1.86E-02 |
104 | GO:0050662: coenzyme binding | 2.14E-02 |
105 | GO:0004791: thioredoxin-disulfide reductase activity | 2.14E-02 |
106 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 2.59E-02 |
107 | GO:0005200: structural constituent of cytoskeleton | 2.83E-02 |
108 | GO:0008483: transaminase activity | 2.83E-02 |
109 | GO:0005524: ATP binding | 3.13E-02 |
110 | GO:0016168: chlorophyll binding | 3.19E-02 |
111 | GO:0008236: serine-type peptidase activity | 3.58E-02 |
112 | GO:0000287: magnesium ion binding | 3.89E-02 |
113 | GO:0004601: peroxidase activity | 3.96E-02 |
114 | GO:0004222: metalloendopeptidase activity | 3.97E-02 |
115 | GO:0016491: oxidoreductase activity | 4.37E-02 |
116 | GO:0003746: translation elongation factor activity | 4.39E-02 |
117 | GO:0016740: transferase activity | 4.76E-02 |
118 | GO:0050661: NADP binding | 4.81E-02 |
119 | GO:0042393: histone binding | 4.81E-02 |
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0031224: intrinsic component of membrane | 0.00E+00 |
2 | GO:0009571: proplastid stroma | 0.00E+00 |
3 | GO:0009507: chloroplast | 9.90E-45 |
4 | GO:0009941: chloroplast envelope | 2.49E-24 |
5 | GO:0009570: chloroplast stroma | 5.03E-20 |
6 | GO:0009535: chloroplast thylakoid membrane | 1.52E-13 |
7 | GO:0009543: chloroplast thylakoid lumen | 2.00E-11 |
8 | GO:0009579: thylakoid | 6.15E-07 |
9 | GO:0009534: chloroplast thylakoid | 5.91E-06 |
10 | GO:0009706: chloroplast inner membrane | 4.25E-05 |
11 | GO:0009654: photosystem II oxygen evolving complex | 7.83E-05 |
12 | GO:0009536: plastid | 7.99E-05 |
13 | GO:0031977: thylakoid lumen | 1.10E-04 |
14 | GO:0019898: extrinsic component of membrane | 2.29E-04 |
15 | GO:0017101: aminoacyl-tRNA synthetase multienzyme complex | 2.39E-04 |
16 | GO:0009344: nitrite reductase complex [NAD(P)H] | 2.39E-04 |
17 | GO:0009782: photosystem I antenna complex | 2.39E-04 |
18 | GO:0043190: ATP-binding cassette (ABC) transporter complex | 2.39E-04 |
19 | GO:0010319: stromule | 3.53E-04 |
20 | GO:0031969: chloroplast membrane | 4.87E-04 |
21 | GO:0030095: chloroplast photosystem II | 7.56E-04 |
22 | GO:0009346: citrate lyase complex | 1.23E-03 |
23 | GO:0055035: plastid thylakoid membrane | 2.09E-03 |
24 | GO:0010287: plastoglobule | 3.01E-03 |
25 | GO:0009295: nucleoid | 3.21E-03 |
26 | GO:0009533: chloroplast stromal thylakoid | 3.64E-03 |
27 | GO:0045298: tubulin complex | 5.48E-03 |
28 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 5.48E-03 |
29 | GO:0009508: plastid chromosome | 9.11E-03 |
30 | GO:0000312: plastid small ribosomal subunit | 9.92E-03 |
31 | GO:0030659: cytoplasmic vesicle membrane | 9.92E-03 |
32 | GO:0005874: microtubule | 1.06E-02 |
33 | GO:0030076: light-harvesting complex | 1.07E-02 |
34 | GO:0005875: microtubule associated complex | 1.16E-02 |
35 | GO:0042651: thylakoid membrane | 1.34E-02 |
36 | GO:0009532: plastid stroma | 1.43E-02 |
37 | GO:0015935: small ribosomal subunit | 1.43E-02 |
38 | GO:0000775: chromosome, centromeric region | 1.53E-02 |
39 | GO:0005871: kinesin complex | 1.82E-02 |
40 | GO:0005739: mitochondrion | 1.86E-02 |
41 | GO:0009523: photosystem II | 2.25E-02 |
42 | GO:0005759: mitochondrial matrix | 2.33E-02 |
43 | GO:0005778: peroxisomal membrane | 2.83E-02 |
44 | GO:0030529: intracellular ribonucleoprotein complex | 3.07E-02 |
45 | GO:0048046: apoplast | 3.23E-02 |
46 | GO:0046658: anchored component of plasma membrane | 3.39E-02 |
47 | GO:0009707: chloroplast outer membrane | 3.71E-02 |
48 | GO:0000325: plant-type vacuole | 4.11E-02 |