gene detail

Gene description

TAIR ID: AT1G20440

Short description: cold-regulated 47

Pathogen responsiveness: -0.74

General responsiveness: 0.78

Orthologous

Rice:

OS02G0669100

Maize:

GRMZM2G147014

Wheat:

TA.122.1.S1_X_AT

GO biological process

response to cold, response to water deprivation, defense response to fungus, heat acclimation, cold acclimation, response to osmotic stress, response to abscisic acid, response to water

GO cellular component

cytosol, nucleus, membrane

GO molecular function

molecular_function

Protein domain

Pfam	PF00257, Dehydrin

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT4G25480, AT4G25490, AT5G13790, AT1G52890, AT1G24260, AT5G61850, AT2G43010

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 1

click to view PPI network

Coexpression network

GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE26679_EDR1_GC  view

Differentially expressed condition

9 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	1.97	6.65E-03
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	1.50	2.59E-06
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	-2.05	2.20E-08
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	-1.52	1.18E-06
GSE45214	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	2.03	3.00E-09
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	1.60	1.31E-03
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	1.72	5.56E-04
GSE56094	Col, WT, control 3 h	Col, WT, hrpA- 3 h	-1.69	3.06E-03
GSE56094	Col, WT, control 4 h	Col, WT, PstDC3000 4 h	-1.63	3.09E-03