gene detail

Gene description

TAIR ID: AT1G20340

Short description: Cupredoxin superfamily protein

Pathogen responsiveness: -1.37

General responsiveness: 3.22

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

copper ion homeostasis, negative regulation of translation, oxidation-reduction process, response to copper ion, response to UV

GO cellular component

thylakoid, chloroplast stroma, chloroplast thylakoid, chloroplast thylakoid lumen, thylakoid lumen, chloroplast thylakoid membrane, chloroplast, plastid thylakoid membrane

GO molecular function

electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity, copper ion binding

Protein domain

Pfam	PF00127, Copper binding proteins, plastocyanin/azurin family

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath00195: Photosynthesis

Transcriptional regulation

Regulator:
AT2G43010

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 1

click to view PPI network

Coexpression network

GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

6 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-2.00	1.08E-09
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	-2.04	2.07E-03
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	-2.15	1.71E-04
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	-2.46	3.85E-09
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	-1.90	3.73E-06
GSE56094	Col, WT, control 9 h	Col, WT, PstDC3000 9 h	-1.96	3.61E-06