Gene: AT1G18400
     


Gene description


TAIR ID: AT1G18400

Short description: BR enhanced expression 1

Pathogen responsiveness: -0.63

General responsiveness: 0.03

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G145579  

Wheat: No orthologous gene

GO biological process


regulation of transcription, DNA-templated, positive regulation of shade avoidance, transcription


GO cellular component


nucleus


GO molecular function


protein dimerization activity, transcription factor activity, sequence-specific DNA binding


Protein domain


PfamPF00010, Helix-loop-helix DNA-binding domain
SMARTSM00353, HLH

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT5G61850, AT2G43010

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 3

click to view PPI network

Differentially expressed condition


19 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE12856Col, WT, controlCol, WT, Bg h-1.554.06E-07
GSE12856Col, ataf1, controlCol, ataf1, Bg h-1.611.97E-07
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h1.647.50E-08
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h1.732.65E-08
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h1.615.58E-08
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-3.352.98E-04
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-1.781.87E-10
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-1.666.30E-10
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-1.898.47E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-1.723.76E-10
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-1.915.88E-11
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h-1.804.58E-10
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-1.946.08E-11
GSE52979Col, WT, acetoneCol, WT, acetone flg22_2 h-1.811.17E-07
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h-1.896.15E-08
GSE5520Col, WT, control 24 hCol, WT, PsDC3118 Cor- 24 h-1.703.30E-03
GSE5520Col, WT, control 24 hCol, WT, PstDC3000 24 h-2.013.42E-04
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-1.547.31E-03
GSE62537Col, WT, control 48 hCol, WT, V.longisporum 48 h-2.055.34E-03






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