gene detail

Gene description

TAIR ID: AT1G17850

Short description: Rhodanese/Cell cycle control phosphatase superfamily protein

Pathogen responsiveness: -0.58

General responsiveness: -1.33

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G377487

Wheat: No orthologous gene

GO biological process

biological_process

GO cellular component

nucleus

GO molecular function

molecular_function

Protein domain

Pfam	PF00581, Rhodanese-like domain
Pfam	PF12368, Rhodanase C-terminal
SMART	SM00450, RHOD

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790, AT3G14230, AT5G11260

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

9 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE40544	Col, WT, control	Col, WT, PstDC3000 EV	-2.40	9.98E-05
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	-2.57	7.90E-14
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	-1.97	1.56E-11
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	-2.39	3.31E-13
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	-2.07	1.79E-12
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-1.91	6.90E-12
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	-2.27	4.06E-13
GSE45214	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-1.55	1.61E-10
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	-2.67	1.80E-14