co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G17850

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:2000042: negative regulation of double-strand break repair via homologous recombination	0.00E+00
2	GO:1901259: chloroplast rRNA processing	6.56E-06
3	GO:0000476: maturation of 4.5S rRNA	3.77E-05
4	GO:0000967: rRNA 5'-end processing	3.77E-05
5	GO:0043686: co-translational protein modification	3.77E-05
6	GO:0043007: maintenance of rDNA	3.77E-05
7	GO:0006741: NADP biosynthetic process	9.40E-05
8	GO:0080181: lateral root branching	9.40E-05
9	GO:0034470: ncRNA processing	9.40E-05
10	GO:0005977: glycogen metabolic process	1.63E-04
11	GO:0019674: NAD metabolic process	1.63E-04
12	GO:0009052: pentose-phosphate shunt, non-oxidative branch	2.40E-04
13	GO:0019363: pyridine nucleotide biosynthetic process	2.40E-04
14	GO:0010239: chloroplast mRNA processing	2.40E-04
15	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	2.40E-04
16	GO:0010021: amylopectin biosynthetic process	3.24E-04
17	GO:0016558: protein import into peroxisome matrix	4.13E-04
18	GO:0031365: N-terminal protein amino acid modification	4.13E-04
19	GO:0006465: signal peptide processing	4.13E-04
20	GO:0042549: photosystem II stabilization	5.07E-04
21	GO:0016559: peroxisome fission	8.13E-04
22	GO:0017004: cytochrome complex assembly	9.23E-04
23	GO:0019684: photosynthesis, light reaction	1.40E-03
24	GO:0009089: lysine biosynthetic process via diaminopimelate	1.40E-03
25	GO:0072593: reactive oxygen species metabolic process	1.40E-03
26	GO:0010020: chloroplast fission	1.81E-03
27	GO:0019853: L-ascorbic acid biosynthetic process	1.95E-03
28	GO:0010030: positive regulation of seed germination	1.95E-03
29	GO:0048511: rhythmic process	2.56E-03
30	GO:0006012: galactose metabolic process	2.89E-03
31	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	3.22E-03
32	GO:0042631: cellular response to water deprivation	3.40E-03
33	GO:0042752: regulation of circadian rhythm	3.76E-03
34	GO:0019252: starch biosynthetic process	3.94E-03
35	GO:0055072: iron ion homeostasis	3.94E-03
36	GO:0006635: fatty acid beta-oxidation	4.13E-03
37	GO:0016311: dephosphorylation	6.16E-03
38	GO:0007623: circadian rhythm	2.09E-02
39	GO:0010150: leaf senescence	2.09E-02
40	GO:0009658: chloroplast organization	2.85E-02
41	GO:0006412: translation	3.10E-02
42	GO:0005975: carbohydrate metabolic process	3.26E-02
43	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	3.40E-02
44	GO:0044550: secondary metabolite biosynthetic process	3.53E-02
45	GO:0015979: photosynthesis	3.65E-02
46	GO:0045454: cell redox homeostasis	3.78E-02
47	GO:0006281: DNA repair	4.39E-02
48	GO:0008152: metabolic process	4.70E-02
49	GO:0009793: embryo development ending in seed dormancy	4.94E-02

Rank	GO Term	Adjusted P value
1	GO:0010349: L-galactose dehydrogenase activity	0.00E+00
2	GO:0042623: ATPase activity, coupled	0.00E+00
3	GO:0004033: aldo-keto reductase (NADP) activity	1.21E-05
4	GO:0042736: NADH kinase activity	3.77E-05
5	GO:0042586: peptide deformylase activity	3.77E-05
6	GO:0019156: isoamylase activity	9.40E-05
7	GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase	9.40E-05
8	GO:0004751: ribose-5-phosphate isomerase activity	1.63E-04
9	GO:0004556: alpha-amylase activity	5.07E-04
10	GO:0042578: phosphoric ester hydrolase activity	5.07E-04
11	GO:0003951: NAD+ kinase activity	9.23E-04
12	GO:0015020: glucuronosyltransferase activity	1.28E-03
13	GO:0004521: endoribonuclease activity	1.53E-03
14	GO:0003993: acid phosphatase activity	7.75E-03
15	GO:0051537: 2 iron, 2 sulfur cluster binding	9.47E-03
16	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	9.99E-03
17	GO:0080043: quercetin 3-O-glucosyltransferase activity	1.33E-02
18	GO:0080044: quercetin 7-O-glucosyltransferase activity	1.33E-02
19	GO:0015035: protein disulfide oxidoreductase activity	1.45E-02
20	GO:0016758: transferase activity, transferring hexosyl groups	1.63E-02
21	GO:0005525: GTP binding	1.74E-02
22	GO:0004252: serine-type endopeptidase activity	1.79E-02
23	GO:0008017: microtubule binding	2.16E-02
24	GO:0008194: UDP-glycosyltransferase activity	2.26E-02
25	GO:0042802: identical protein binding	2.48E-02
26	GO:0008233: peptidase activity	3.28E-02
27	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	3.99E-02
28	GO:0004722: protein serine/threonine phosphatase activity	4.03E-02
29	GO:0003735: structural constituent of ribosome	4.26E-02
30	GO:0003924: GTPase activity	4.39E-02
31	GO:0016787: hydrolase activity	4.58E-02
32	GO:0009055: electron carrier activity	4.61E-02

Rank	GO Term	Adjusted P value
1	GO:0010368: chloroplast isoamylase complex	0.00E+00
2	GO:0009507: chloroplast	2.44E-09
3	GO:0005787: signal peptidase complex	3.77E-05
4	GO:0042646: plastid nucleoid	2.40E-04
5	GO:0009570: chloroplast stroma	7.22E-04
6	GO:0042644: chloroplast nucleoid	1.04E-03
7	GO:0005778: peroxisomal membrane	4.90E-03
8	GO:0009707: chloroplast outer membrane	6.38E-03
9	GO:0009534: chloroplast thylakoid	1.28E-02
10	GO:0010287: plastoglobule	1.60E-02
11	GO:0009543: chloroplast thylakoid lumen	1.66E-02
12	GO:0005840: ribosome	2.25E-02
13	GO:0031969: chloroplast membrane	3.32E-02
14	GO:0043231: intracellular membrane-bounded organelle	4.70E-02
15	GO:0009535: chloroplast thylakoid membrane	4.79E-02