gene detail

Gene description

TAIR ID: AT1G17840

Short description: white-brown complex homolog protein 11

Pathogen responsiveness: -0.13

General responsiveness: 1.10

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G177812

Wheat:

TAAFFX.60123.1.S1_AT

GO biological process

cotyledon vascular tissue pattern formation, response to abscisic acid, response to salt stress, stem vascular tissue pattern formation, cutin transport, fatty acid transport, response to wounding

GO cellular component

plasma membrane, external side of plasma membrane, integral component of membrane

GO molecular function

ATP binding, ATPase activity, coupled to transmembrane movement of substances, fatty acid transporter activity, protein homodimerization activity

Protein domain

Pfam	PF00005, ABC transporter
Pfam	PF01061, ABC-2 type transporter
SMART	SM00382, AAA

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT3G24050, AT2G20180, AT2G43010, AT4G36990

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 19 (Top10%)

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

22 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE13739	Col, WT, control 7 d	Col, WT, G.orontii 7 d	-1.59	6.85E-12
GSE17464	Laer, JA+Flg22 0 h	Laer, JA+Flg22 2 h	-1.64	9.67E-03
GSE17464	Penta, control	Penta, Flg22 2 h	-1.65	4.39E-03
GSE17500	Col, 35S:AFB1, control 0 h	Col, 35S:AFB1, PstDC3000 24 h	-1.77	1.72E-03
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	-1.85	9.13E-04
GSE17500	Col, miR393, control 0 h	Col, miR393, PstDC3000 24 h	-2.09	4.24E-04
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-3.46	2.59E-10
GSE21920	Col, WT, mock	Col, WT, Pto HopZ1a 6 h	-1.51	4.31E-06
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-1.60	1.62E-02
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-2.24	4.31E-04
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	-1.68	3.76E-02
GSE5520	Col, WT, control 24 h	Col, WT, PstDC3000 24 h	-2.05	2.33E-02
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	-2.00	3.11E-03
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	-2.56	3.31E-13
GSE56094	Col, WT, control 10 h	Col, WT, hrpA- 10 h	-1.87	1.93E-07
GSE56094	Col, WT, control 11 h	Col, WT, PstDC3000 11 h	-1.73	3.04E-07
GSE56094	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	-1.95	1.10E-08
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	-2.30	3.18E-11
GSE56094	Col, WT, control 8 h	Col, WT, hrpA- 8 h	-1.85	2.09E-07
GSE56094	Col, WT, control 9 h	Col, WT, PstDC3000 9 h	-2.09	2.61E-09
GSE56094	Col, WT, control 9 h	Col, WT, hrpA- 9 h	-2.08	1.46E-08
GSE6176	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	-1.86	2.16E-03