gene detail

Gene description

TAIR ID: AT1G16300

Short description: glyceraldehyde-3-phosphate dehydrogenase of plastid 2

Pathogen responsiveness: NA

General responsiveness: NA

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat:

TA.10213.1.S1_AT TA.9557.2.S1_A_AT TA.9557.2.S1_X_AT

GO biological process

glycolytic process, glucose metabolic process, amino acid homeostasis, carbohydrate metabolic process, oxidation-reduction process, primary root development

GO cellular component

chloroplast stroma, plastid, chloroplast

GO molecular function

NADP binding, NAD binding, glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity

Protein domain

Pfam	PF02800, Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
Pfam	PF00044, Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
SMART	SM00846, Gp_dh_N

Metabolic pathway

GLUCONEO-PWY: gluconeogenesis I
PWY-5484: glycolysis II (from fructose-6P)
SUCSYN-PWY: sucrose biosynthesis I (from photosynthesis)
GLYCOLYSIS: glycolysis I (from glucose-6P)

KEGG pathway

PATH:ath01200: Carbon metabolism
PATH:ath01230: Biosynthesis of amino acids
PATH:ath00010: Glycolysis / Gluconeogenesis
PATH:ath00710: Carbon fixation in photosynthetic organisms

Transcriptional regulation

Regulator:
AT5G13790, AT1G24260, AT2G43010

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

5 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-1.68	1.37E-02
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	1.64	8.61E-12
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	1.59	1.94E-11
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	1.74	4.91E-12
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	1.72	7.14E-11