Gene: AT1G14290
     

Gene description


TAIR ID: AT1G14290

Short description: sphingoid base hydroxylase 2

Pathogen responsiveness: -0.37

General responsiveness: -0.98

Orthologous


Rice:

OS06G0226950   OS10G0545200   OS07G0101500  

Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


photomorphogenesis, oxidation-reduction process, sphingoid biosynthetic process


GO cellular component


Golgi apparatus, endoplasmic reticulum membrane, integral component of membrane, endoplasmic reticulum


GO molecular function


catalytic activity, sphingolipid delta-4 desaturase activity, sphingosine hydroxylase activity, iron ion binding


Protein domain


PfamPF04116, Fatty acid hydroxylase superfamily

Transcriptional regulation


Regulator:
AT3G24050, AT4G34680, AT5G11260, AT2G45050, AT3G60530

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Differentially expressed condition


14 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h1.656.78E-10
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h1.646.06E-10
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h1.637.31E-10
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h2.001.03E-11
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-1.862.88E-13
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-1.778.86E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-3.193.40E-16
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-2.742.25E-15
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-3.015.64E-16
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h-1.813.37E-12
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-1.664.64E-12
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-2.013.21E-04
GSE5520Col, WT, control 10 hCol, WT, Cor- hrpS- 10 h-1.936.85E-03
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-1.982.97E-03






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