Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G14290

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:2000505: regulation of energy homeostasis0.00E+00
2GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate0.00E+00
3GO:0006223: uracil salvage0.00E+00
4GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation0.00E+00
5GO:0033494: ferulate metabolic process0.00E+00
6GO:1901698: response to nitrogen compound0.00E+00
7GO:2000121: regulation of removal of superoxide radicals0.00E+00
8GO:0042493: response to drug0.00E+00
9GO:0006399: tRNA metabolic process0.00E+00
10GO:0042593: glucose homeostasis0.00E+00
11GO:0042254: ribosome biogenesis5.21E-07
12GO:0006833: water transport8.04E-07
13GO:0006412: translation2.49E-06
14GO:0010411: xyloglucan metabolic process3.12E-06
15GO:0015995: chlorophyll biosynthetic process3.12E-06
16GO:0034220: ion transmembrane transport5.94E-06
17GO:0009735: response to cytokinin8.97E-06
18GO:0006633: fatty acid biosynthetic process4.72E-05
19GO:0045493: xylan catabolic process4.75E-05
20GO:0032544: plastid translation5.41E-05
21GO:0010206: photosystem II repair7.28E-05
22GO:0000038: very long-chain fatty acid metabolic process1.52E-04
23GO:0042546: cell wall biogenesis1.82E-04
24GO:0010207: photosystem II assembly2.65E-04
25GO:0010027: thylakoid membrane organization3.13E-04
26GO:0015979: photosynthesis4.62E-04
27GO:0042372: phylloquinone biosynthetic process4.90E-04
28GO:0070509: calcium ion import5.72E-04
29GO:0007263: nitric oxide mediated signal transduction5.72E-04
30GO:0010442: guard cell morphogenesis5.72E-04
31GO:0042371: vitamin K biosynthetic process5.72E-04
32GO:0051247: positive regulation of protein metabolic process5.72E-04
33GO:2000905: negative regulation of starch metabolic process5.72E-04
34GO:0071596: ubiquitin-dependent protein catabolic process via the N-end rule pathway5.72E-04
35GO:0071588: hydrogen peroxide mediated signaling pathway5.72E-04
36GO:0010729: positive regulation of hydrogen peroxide biosynthetic process5.72E-04
37GO:0009772: photosynthetic electron transport in photosystem II6.28E-04
38GO:0009645: response to low light intensity stimulus6.28E-04
39GO:0010444: guard mother cell differentiation6.28E-04
40GO:0009826: unidimensional cell growth7.95E-04
41GO:0009658: chloroplast organization8.58E-04
42GO:0042335: cuticle development9.13E-04
43GO:0000413: protein peptidyl-prolyl isomerization9.13E-04
44GO:0009932: cell tip growth9.50E-04
45GO:0006783: heme biosynthetic process1.14E-03
46GO:0000902: cell morphogenesis1.14E-03
47GO:0052541: plant-type cell wall cellulose metabolic process1.23E-03
48GO:0060919: auxin influx1.23E-03
49GO:0031648: protein destabilization1.23E-03
50GO:0006521: regulation of cellular amino acid metabolic process1.23E-03
51GO:0010583: response to cyclopentenone1.42E-03
52GO:0006782: protoporphyrinogen IX biosynthetic process1.56E-03
53GO:0043069: negative regulation of programmed cell death1.56E-03
54GO:0055085: transmembrane transport1.64E-03
55GO:0071555: cell wall organization1.81E-03
56GO:0006810: transport1.88E-03
57GO:0048586: regulation of long-day photoperiodism, flowering2.02E-03
58GO:0006518: peptide metabolic process2.02E-03
59GO:0015840: urea transport2.02E-03
60GO:0071705: nitrogen compound transport2.02E-03
61GO:0016024: CDP-diacylglycerol biosynthetic process2.07E-03
62GO:0010143: cutin biosynthetic process2.67E-03
63GO:0051639: actin filament network formation2.93E-03
64GO:0034059: response to anoxia2.93E-03
65GO:0009650: UV protection2.93E-03
66GO:0080170: hydrogen peroxide transmembrane transport2.93E-03
67GO:0010731: protein glutathionylation2.93E-03
68GO:0006424: glutamyl-tRNA aminoacylation2.93E-03
69GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity2.93E-03
70GO:2001141: regulation of RNA biosynthetic process2.93E-03
71GO:0051513: regulation of monopolar cell growth2.93E-03
72GO:0010030: positive regulation of seed germination2.99E-03
73GO:0000027: ribosomal large subunit assembly3.70E-03
74GO:0019344: cysteine biosynthetic process3.70E-03
75GO:0051764: actin crosslink formation3.95E-03
76GO:0071249: cellular response to nitrate3.95E-03
77GO:2000306: positive regulation of photomorphogenesis3.95E-03
78GO:2000122: negative regulation of stomatal complex development3.95E-03
79GO:0030104: water homeostasis3.95E-03
80GO:0006183: GTP biosynthetic process3.95E-03
81GO:0044206: UMP salvage3.95E-03
82GO:0010037: response to carbon dioxide3.95E-03
83GO:0015976: carbon utilization3.95E-03
84GO:0007017: microtubule-based process4.09E-03
85GO:0034052: positive regulation of plant-type hypersensitive response5.07E-03
86GO:0032543: mitochondrial translation5.07E-03
87GO:0010236: plastoquinone biosynthetic process5.07E-03
88GO:0043097: pyrimidine nucleoside salvage5.07E-03
89GO:0009831: plant-type cell wall modification involved in multidimensional cell growth5.38E-03
90GO:0009306: protein secretion5.86E-03
91GO:0006655: phosphatidylglycerol biosynthetic process6.29E-03
92GO:1902456: regulation of stomatal opening6.29E-03
93GO:0016554: cytidine to uridine editing6.29E-03
94GO:0010190: cytochrome b6f complex assembly6.29E-03
95GO:0009117: nucleotide metabolic process6.29E-03
96GO:0006206: pyrimidine nucleobase metabolic process6.29E-03
97GO:0007035: vacuolar acidification6.29E-03
98GO:0032973: amino acid export6.29E-03
99GO:0006751: glutathione catabolic process6.29E-03
100GO:0042549: photosystem II stabilization6.29E-03
101GO:0009789: positive regulation of abscisic acid-activated signaling pathway6.35E-03
102GO:0045490: pectin catabolic process6.41E-03
103GO:0045454: cell redox homeostasis6.65E-03
104GO:0009955: adaxial/abaxial pattern specification7.60E-03
105GO:0009612: response to mechanical stimulus7.60E-03
106GO:0006694: steroid biosynthetic process7.60E-03
107GO:1901259: chloroplast rRNA processing7.60E-03
108GO:0009854: oxidative photosynthetic carbon pathway7.60E-03
109GO:0010019: chloroplast-nucleus signaling pathway7.60E-03
110GO:0010555: response to mannitol7.60E-03
111GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity7.60E-03
112GO:0007166: cell surface receptor signaling pathway7.86E-03
113GO:0009416: response to light stimulus8.82E-03
114GO:0043090: amino acid import9.00E-03
115GO:0030497: fatty acid elongation9.00E-03
116GO:0051510: regulation of unidimensional cell growth9.00E-03
117GO:0050829: defense response to Gram-negative bacterium9.00E-03
118GO:0009610: response to symbiotic fungus9.00E-03
119GO:0000302: response to reactive oxygen species9.18E-03
120GO:0071554: cell wall organization or biogenesis9.18E-03
121GO:0016132: brassinosteroid biosynthetic process9.18E-03
122GO:0007155: cell adhesion1.05E-02
123GO:0043068: positive regulation of programmed cell death1.05E-02
124GO:0009642: response to light intensity1.05E-02
125GO:0006605: protein targeting1.05E-02
126GO:0045010: actin nucleation1.05E-02
127GO:0009828: plant-type cell wall loosening1.12E-02
128GO:0071482: cellular response to light stimulus1.21E-02
129GO:0009808: lignin metabolic process1.21E-02
130GO:0016126: sterol biosynthetic process1.33E-02
131GO:0051865: protein autoubiquitination1.37E-02
132GO:0080144: amino acid homeostasis1.37E-02
133GO:0009742: brassinosteroid mediated signaling pathway1.37E-02
134GO:0009638: phototropism1.54E-02
135GO:0006779: porphyrin-containing compound biosynthetic process1.54E-02
136GO:1900865: chloroplast RNA modification1.54E-02
137GO:0009870: defense response signaling pathway, resistance gene-dependent1.72E-02
138GO:0006535: cysteine biosynthetic process from serine1.72E-02
139GO:0048829: root cap development1.72E-02
140GO:0006949: syncytium formation1.72E-02
141GO:0018298: protein-chromophore linkage1.75E-02
142GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.81E-02
143GO:0000160: phosphorelay signal transduction system1.84E-02
144GO:0009773: photosynthetic electron transport in photosystem I1.91E-02
145GO:0006352: DNA-templated transcription, initiation1.91E-02
146GO:0006415: translational termination1.91E-02
147GO:0048765: root hair cell differentiation1.91E-02
148GO:0030148: sphingolipid biosynthetic process1.91E-02
149GO:0009684: indoleacetic acid biosynthetic process1.91E-02
150GO:0010015: root morphogenesis1.91E-02
151GO:0009834: plant-type secondary cell wall biogenesis1.93E-02
152GO:0042744: hydrogen peroxide catabolic process2.00E-02
153GO:0010119: regulation of stomatal movement2.02E-02
154GO:0006790: sulfur compound metabolic process2.11E-02
155GO:0015706: nitrate transport2.11E-02
156GO:0030036: actin cytoskeleton organization2.31E-02
157GO:0050826: response to freezing2.31E-02
158GO:0009725: response to hormone2.31E-02
159GO:0034599: cellular response to oxidative stress2.32E-02
160GO:0007623: circadian rhythm2.55E-02
161GO:0006631: fatty acid metabolic process2.64E-02
162GO:0010167: response to nitrate2.73E-02
163GO:0046854: phosphatidylinositol phosphorylation2.73E-02
164GO:0010053: root epidermal cell differentiation2.73E-02
165GO:0010025: wax biosynthetic process2.95E-02
166GO:0006071: glycerol metabolic process2.95E-02
167GO:0019762: glucosinolate catabolic process2.95E-02
168GO:0009644: response to high light intensity3.10E-02
169GO:0008643: carbohydrate transport3.10E-02
170GO:0005975: carbohydrate metabolic process3.15E-02
171GO:0009116: nucleoside metabolic process3.17E-02
172GO:0051017: actin filament bundle assembly3.17E-02
173GO:0005992: trehalose biosynthetic process3.17E-02
174GO:0046686: response to cadmium ion3.32E-02
175GO:0010026: trichome differentiation3.40E-02
176GO:0009768: photosynthesis, light harvesting in photosystem I3.40E-02
177GO:0009664: plant-type cell wall organization3.59E-02
178GO:0019915: lipid storage3.64E-02
179GO:0061077: chaperone-mediated protein folding3.64E-02
180GO:0003333: amino acid transmembrane transport3.64E-02
181GO:0015992: proton transport3.64E-02
182GO:0048511: rhythmic process3.64E-02
183GO:0009651: response to salt stress3.66E-02
184GO:0009736: cytokinin-activated signaling pathway3.85E-02
185GO:0009814: defense response, incompatible interaction3.88E-02
186GO:2000022: regulation of jasmonic acid mediated signaling pathway3.88E-02
187GO:0035428: hexose transmembrane transport3.88E-02
188GO:0031348: negative regulation of defense response3.88E-02
189GO:0009411: response to UV4.13E-02
190GO:0006012: galactose metabolic process4.13E-02
191GO:0042127: regulation of cell proliferation4.38E-02
192GO:0006284: base-excision repair4.38E-02
193GO:0019722: calcium-mediated signaling4.38E-02
194GO:0070417: cellular response to cold4.64E-02
195GO:0009860: pollen tube growth4.80E-02
196GO:0009626: plant-type hypersensitive response4.84E-02
197GO:0042631: cellular response to water deprivation4.90E-02
198GO:0000226: microtubule cytoskeleton organization4.90E-02
199GO:0042391: regulation of membrane potential4.90E-02
200GO:0010087: phloem or xylem histogenesis4.90E-02
RankGO TermAdjusted P value
1GO:0005222: intracellular cAMP activated cation channel activity0.00E+00
2GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity0.00E+00
3GO:0061634: alpha-D-xyloside xylohydrolase0.00E+00
4GO:0047513: 1,2-alpha-L-fucosidase activity0.00E+00
5GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity0.00E+00
6GO:0043864: indoleacetamide hydrolase activity0.00E+00
7GO:0008887: glycerate kinase activity0.00E+00
8GO:0080132: fatty acid alpha-hydroxylase activity0.00E+00
9GO:0080176: xyloglucan 1,6-alpha-xylosidase activity0.00E+00
10GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity0.00E+00
11GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity0.00E+00
12GO:0008756: o-succinylbenzoate-CoA ligase activity0.00E+00
13GO:0019146: arabinose-5-phosphate isomerase activity0.00E+00
14GO:0050614: delta24-sterol reductase activity0.00E+00
15GO:0019843: rRNA binding7.33E-10
16GO:0003735: structural constituent of ribosome5.98E-09
17GO:0003755: peptidyl-prolyl cis-trans isomerase activity1.36E-07
18GO:0005528: FK506 binding1.08E-06
19GO:0015250: water channel activity1.88E-06
20GO:0016762: xyloglucan:xyloglucosyl transferase activity1.25E-05
21GO:0016798: hydrolase activity, acting on glycosyl bonds4.59E-05
22GO:0016851: magnesium chelatase activity1.00E-04
23GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds1.77E-04
24GO:0004040: amidase activity2.63E-04
25GO:0102336: 3-oxo-arachidoyl-CoA synthase activity3.60E-04
26GO:0102337: 3-oxo-cerotoyl-CoA synthase activity3.60E-04
27GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity3.60E-04
28GO:0004130: cytochrome-c peroxidase activity3.68E-04
29GO:0051920: peroxiredoxin activity4.90E-04
30GO:0052631: sphingolipid delta-8 desaturase activity5.72E-04
31GO:0009374: biotin binding5.72E-04
32GO:0004655: porphobilinogen synthase activity5.72E-04
33GO:0015200: methylammonium transmembrane transporter activity5.72E-04
34GO:0004853: uroporphyrinogen decarboxylase activity5.72E-04
35GO:0005221: intracellular cyclic nucleotide activated cation channel activity5.72E-04
36GO:0000248: C-5 sterol desaturase activity5.72E-04
37GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity5.72E-04
38GO:0016209: antioxidant activity7.81E-04
39GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity1.23E-03
40GO:0008967: phosphoglycolate phosphatase activity1.23E-03
41GO:0003839: gamma-glutamylcyclotransferase activity1.23E-03
42GO:0003938: IMP dehydrogenase activity1.23E-03
43GO:0004675: transmembrane receptor protein serine/threonine kinase activity1.35E-03
44GO:0010277: chlorophyllide a oxygenase [overall] activity2.02E-03
45GO:0050734: hydroxycinnamoyltransferase activity2.02E-03
46GO:0004148: dihydrolipoyl dehydrogenase activity2.02E-03
47GO:0045174: glutathione dehydrogenase (ascorbate) activity2.02E-03
48GO:0035529: NADH pyrophosphatase activity2.93E-03
49GO:0016149: translation release factor activity, codon specific2.93E-03
50GO:0031176: endo-1,4-beta-xylanase activity2.93E-03
51GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds3.95E-03
52GO:0016987: sigma factor activity3.95E-03
53GO:0009044: xylan 1,4-beta-xylosidase activity3.95E-03
54GO:0010328: auxin influx transmembrane transporter activity3.95E-03
55GO:0004506: squalene monooxygenase activity3.95E-03
56GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity3.95E-03
57GO:0046556: alpha-L-arabinofuranosidase activity3.95E-03
58GO:0015204: urea transmembrane transporter activity3.95E-03
59GO:0004659: prenyltransferase activity3.95E-03
60GO:0001053: plastid sigma factor activity3.95E-03
61GO:0004845: uracil phosphoribosyltransferase activity3.95E-03
62GO:0016836: hydro-lyase activity3.95E-03
63GO:0003993: acid phosphatase activity4.23E-03
64GO:0009922: fatty acid elongase activity5.07E-03
65GO:0003959: NADPH dehydrogenase activity5.07E-03
66GO:0003989: acetyl-CoA carboxylase activity5.07E-03
67GO:0008725: DNA-3-methyladenine glycosylase activity5.07E-03
68GO:0030570: pectate lyase activity5.38E-03
69GO:0051537: 2 iron, 2 sulfur cluster binding6.12E-03
70GO:0016208: AMP binding6.29E-03
71GO:0016462: pyrophosphatase activity6.29E-03
72GO:0016688: L-ascorbate peroxidase activity6.29E-03
73GO:0004366: glycerol-3-phosphate O-acyltransferase activity6.29E-03
74GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity6.29E-03
75GO:0008200: ion channel inhibitor activity6.29E-03
76GO:0008519: ammonium transmembrane transporter activity6.29E-03
77GO:0051753: mannan synthase activity7.60E-03
78GO:0004017: adenylate kinase activity7.60E-03
79GO:0004849: uridine kinase activity7.60E-03
80GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity7.60E-03
81GO:0005261: cation channel activity7.60E-03
82GO:0005242: inward rectifier potassium channel activity7.60E-03
83GO:0004124: cysteine synthase activity7.60E-03
84GO:0004034: aldose 1-epimerase activity1.05E-02
85GO:0000156: phosphorelay response regulator activity1.05E-02
86GO:0004033: aldo-keto reductase (NADP) activity1.05E-02
87GO:0004650: polygalacturonase activity1.14E-02
88GO:0016722: oxidoreductase activity, oxidizing metal ions1.19E-02
89GO:0005200: structural constituent of cytoskeleton1.19E-02
90GO:0004601: peroxidase activity1.25E-02
91GO:0016413: O-acetyltransferase activity1.26E-02
92GO:0016597: amino acid binding1.26E-02
93GO:0016746: transferase activity, transferring acyl groups1.32E-02
94GO:0008889: glycerophosphodiester phosphodiesterase activity1.37E-02
95GO:0003747: translation release factor activity1.37E-02
96GO:0016168: chlorophyll binding1.41E-02
97GO:0102483: scopolin beta-glucosidase activity1.57E-02
98GO:0008236: serine-type peptidase activity1.66E-02
99GO:0004805: trehalose-phosphatase activity1.72E-02
100GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity1.75E-02
101GO:0046961: proton-transporting ATPase activity, rotational mechanism1.91E-02
102GO:0008794: arsenate reductase (glutaredoxin) activity1.91E-02
103GO:0004693: cyclin-dependent protein serine/threonine kinase activity1.93E-02
104GO:0008378: galactosyltransferase activity2.11E-02
105GO:0004565: beta-galactosidase activity2.31E-02
106GO:0004089: carbonate dehydratase activity2.31E-02
107GO:0031072: heat shock protein binding2.31E-02
108GO:0005262: calcium channel activity2.31E-02
109GO:0016491: oxidoreductase activity2.36E-02
110GO:0008422: beta-glucosidase activity2.42E-02
111GO:0030553: cGMP binding2.73E-02
112GO:0051119: sugar transmembrane transporter activity2.73E-02
113GO:0030552: cAMP binding2.73E-02
114GO:0004364: glutathione transferase activity2.75E-02
115GO:0031409: pigment binding2.95E-02
116GO:0015293: symporter activity3.22E-02
117GO:0005515: protein binding3.35E-02
118GO:0005216: ion channel activity3.40E-02
119GO:0022891: substrate-specific transmembrane transporter activity4.13E-02
120GO:0015171: amino acid transmembrane transporter activity4.26E-02
121GO:0045330: aspartyl esterase activity4.26E-02
122GO:0003756: protein disulfide isomerase activity4.38E-02
123GO:0008514: organic anion transmembrane transporter activity4.38E-02
124GO:0016788: hydrolase activity, acting on ester bonds4.49E-02
125GO:0030551: cyclic nucleotide binding4.90E-02
126GO:0008289: lipid binding4.95E-02
RankGO TermAdjusted P value
1GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex0.00E+00
2GO:0044391: ribosomal subunit0.00E+00
3GO:0009507: chloroplast2.14E-28
4GO:0009570: chloroplast stroma4.93E-27
5GO:0009941: chloroplast envelope3.16E-19
6GO:0031977: thylakoid lumen7.05E-17
7GO:0009543: chloroplast thylakoid lumen1.30E-16
8GO:0009535: chloroplast thylakoid membrane2.23E-15
9GO:0009505: plant-type cell wall1.49E-11
10GO:0009579: thylakoid1.73E-11
11GO:0009534: chloroplast thylakoid1.85E-10
12GO:0048046: apoplast1.04E-09
13GO:0005618: cell wall2.37E-09
14GO:0005840: ribosome8.55E-08
15GO:0005576: extracellular region1.14E-07
16GO:0016020: membrane2.69E-06
17GO:0031225: anchored component of membrane3.39E-06
18GO:0010007: magnesium chelatase complex4.75E-05
19GO:0046658: anchored component of plasma membrane1.34E-04
20GO:0009654: photosystem II oxygen evolving complex4.71E-04
21GO:0005887: integral component of plasma membrane4.82E-04
22GO:0009782: photosystem I antenna complex5.72E-04
23GO:0043674: columella5.72E-04
24GO:0009533: chloroplast stromal thylakoid6.28E-04
25GO:0042807: central vacuole6.28E-04
26GO:0045298: tubulin complex1.14E-03
27GO:0019898: extrinsic component of membrane1.20E-03
28GO:0009509: chromoplast2.02E-03
29GO:0009317: acetyl-CoA carboxylase complex2.02E-03
30GO:0000311: plastid large ribosomal subunit2.07E-03
31GO:0009506: plasmodesma2.61E-03
32GO:0032432: actin filament bundle2.93E-03
33GO:0005886: plasma membrane3.53E-03
34GO:0015935: small ribosomal subunit4.50E-03
35GO:0000220: vacuolar proton-transporting V-type ATPase, V0 domain5.07E-03
36GO:0031209: SCAR complex6.29E-03
37GO:0016021: integral component of membrane8.82E-03
38GO:0000326: protein storage vacuole1.21E-02
39GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)1.37E-02
40GO:0005763: mitochondrial small ribosomal subunit1.37E-02
41GO:0022625: cytosolic large ribosomal subunit1.86E-02
42GO:0005774: vacuolar membrane1.88E-02
43GO:0005884: actin filament1.91E-02
44GO:0015934: large ribosomal subunit2.02E-02
45GO:0009536: plastid2.04E-02
46GO:0030095: chloroplast photosystem II2.51E-02
47GO:0009705: plant-type vacuole membrane2.55E-02
48GO:0030076: light-harvesting complex2.73E-02
49GO:0005773: vacuole2.79E-02
50GO:0042651: thylakoid membrane3.40E-02
<
Gene type



Gene DE type