co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G14290

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0045184: establishment of protein localization	0.00E+00
2	GO:0031222: arabinan catabolic process	0.00E+00
3	GO:0042352: GDP-L-fucose salvage	0.00E+00
4	GO:0061157: mRNA destabilization	0.00E+00
5	GO:0043392: negative regulation of DNA binding	0.00E+00
6	GO:2000469: negative regulation of peroxidase activity	0.00E+00
7	GO:0010422: regulation of brassinosteroid biosynthetic process	0.00E+00
8	GO:0017038: protein import	0.00E+00
9	GO:0046838: phosphorylated carbohydrate dephosphorylation	0.00E+00
10	GO:0090697: post-embryonic plant organ morphogenesis	0.00E+00
11	GO:1903224: regulation of endodermal cell differentiation	0.00E+00
12	GO:0080127: fruit septum development	0.00E+00
13	GO:1905255: regulation of RNA binding transcription factor activity	0.00E+00
14	GO:0009734: auxin-activated signaling pathway	3.41E-08
15	GO:0009733: response to auxin	5.90E-07
16	GO:0046620: regulation of organ growth	1.22E-06
17	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.48E-04
18	GO:0005983: starch catabolic process	2.51E-04
19	GO:0048497: maintenance of floral organ identity	3.29E-04
20	GO:0016554: cytidine to uridine editing	4.58E-04
21	GO:0040008: regulation of growth	5.03E-04
22	GO:0010480: microsporocyte differentiation	6.60E-04
23	GO:0035987: endodermal cell differentiation	6.60E-04
24	GO:1902458: positive regulation of stomatal opening	6.60E-04
25	GO:0015904: tetracycline transport	6.60E-04
26	GO:0000305: response to oxygen radical	6.60E-04
27	GO:0000023: maltose metabolic process	6.60E-04
28	GO:0006434: seryl-tRNA aminoacylation	6.60E-04
29	GO:0042659: regulation of cell fate specification	6.60E-04
30	GO:0000025: maltose catabolic process	6.60E-04
31	GO:0005980: glycogen catabolic process	6.60E-04
32	GO:0030198: extracellular matrix organization	6.60E-04
33	GO:0097056: selenocysteinyl-tRNA(Sec) biosynthetic process	6.60E-04
34	GO:0006438: valyl-tRNA aminoacylation	6.60E-04
35	GO:0090558: plant epidermis development	6.60E-04
36	GO:0030307: positive regulation of cell growth	7.76E-04
37	GO:2000070: regulation of response to water deprivation	9.63E-04
38	GO:0010182: sugar mediated signaling pathway	1.32E-03
39	GO:0007275: multicellular organism development	1.34E-03
40	GO:0071497: cellular response to freezing	1.42E-03
41	GO:0080009: mRNA methylation	1.42E-03
42	GO:0009786: regulation of asymmetric cell division	1.42E-03
43	GO:0031648: protein destabilization	1.42E-03
44	GO:1903426: regulation of reactive oxygen species biosynthetic process	1.42E-03
45	GO:0006568: tryptophan metabolic process	1.42E-03
46	GO:2000123: positive regulation of stomatal complex development	1.42E-03
47	GO:0043039: tRNA aminoacylation	1.42E-03
48	GO:0006741: NADP biosynthetic process	1.42E-03
49	GO:0009629: response to gravity	1.42E-03
50	GO:0007154: cell communication	1.42E-03
51	GO:0018026: peptidyl-lysine monomethylation	1.42E-03
52	GO:0009646: response to absence of light	1.45E-03
53	GO:0009416: response to light stimulus	1.57E-03
54	GO:0009638: phototropism	1.66E-03
55	GO:1900865: chloroplast RNA modification	1.66E-03
56	GO:0071554: cell wall organization or biogenesis	1.73E-03
57	GO:0048829: root cap development	1.94E-03
58	GO:0071398: cellular response to fatty acid	2.35E-03
59	GO:0030261: chromosome condensation	2.35E-03
60	GO:0019674: NAD metabolic process	2.35E-03
61	GO:0033591: response to L-ascorbic acid	2.35E-03
62	GO:0090708: specification of plant organ axis polarity	2.35E-03
63	GO:0010027: thylakoid membrane organization	2.78E-03
64	GO:0010588: cotyledon vascular tissue pattern formation	2.94E-03
65	GO:2000012: regulation of auxin polar transport	2.94E-03
66	GO:0010628: positive regulation of gene expression	2.94E-03
67	GO:0010102: lateral root morphogenesis	2.94E-03
68	GO:0010020: chloroplast fission	3.32E-03
69	GO:0043572: plastid fission	3.41E-03
70	GO:0019363: pyridine nucleotide biosynthetic process	3.41E-03
71	GO:0010371: regulation of gibberellin biosynthetic process	3.41E-03
72	GO:0009102: biotin biosynthetic process	3.41E-03
73	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	3.41E-03
74	GO:0046739: transport of virus in multicellular host	3.41E-03
75	GO:0016042: lipid catabolic process	4.18E-03
76	GO:0006749: glutathione metabolic process	4.60E-03
77	GO:0042938: dipeptide transport	4.60E-03
78	GO:0009755: hormone-mediated signaling pathway	4.60E-03
79	GO:1901141: regulation of lignin biosynthetic process	4.60E-03
80	GO:0010109: regulation of photosynthesis	4.60E-03
81	GO:0042274: ribosomal small subunit biogenesis	4.60E-03
82	GO:0030104: water homeostasis	4.60E-03
83	GO:0006221: pyrimidine nucleotide biosynthetic process	4.60E-03
84	GO:2000038: regulation of stomatal complex development	4.60E-03
85	GO:0009658: chloroplast organization	4.90E-03
86	GO:0009793: embryo development ending in seed dormancy	5.19E-03
87	GO:0045038: protein import into chloroplast thylakoid membrane	5.92E-03
88	GO:0045487: gibberellin catabolic process	5.92E-03
89	GO:0010438: cellular response to sulfur starvation	5.92E-03
90	GO:0010375: stomatal complex patterning	5.92E-03
91	GO:0016131: brassinosteroid metabolic process	5.92E-03
92	GO:0009686: gibberellin biosynthetic process	6.72E-03
93	GO:0018258: protein O-linked glycosylation via hydroxyproline	7.35E-03
94	GO:0009926: auxin polar transport	7.35E-03
95	GO:0010405: arabinogalactan protein metabolic process	7.35E-03
96	GO:0009959: negative gravitropism	7.35E-03
97	GO:0009913: epidermal cell differentiation	7.35E-03
98	GO:0010358: leaf shaping	7.35E-03
99	GO:0060918: auxin transport	7.35E-03
100	GO:1902456: regulation of stomatal opening	7.35E-03
101	GO:0042793: transcription from plastid promoter	7.35E-03
102	GO:0003006: developmental process involved in reproduction	7.35E-03
103	GO:2000033: regulation of seed dormancy process	8.89E-03
104	GO:0030488: tRNA methylation	8.89E-03
105	GO:0031930: mitochondria-nucleus signaling pathway	8.89E-03
106	GO:2000067: regulation of root morphogenesis	8.89E-03
107	GO:0006458: 'de novo' protein folding	8.89E-03
108	GO:0042026: protein refolding	8.89E-03
109	GO:0048509: regulation of meristem development	8.89E-03
110	GO:0006855: drug transmembrane transport	8.95E-03
111	GO:0009741: response to brassinosteroid	9.27E-03
112	GO:0045892: negative regulation of transcription, DNA-templated	1.01E-02
113	GO:0010161: red light signaling pathway	1.05E-02
114	GO:0030497: fatty acid elongation	1.05E-02
115	GO:0010098: suspensor development	1.05E-02
116	GO:0048437: floral organ development	1.05E-02
117	GO:0000122: negative regulation of transcription from RNA polymerase II promoter	1.05E-02
118	GO:0016132: brassinosteroid biosynthetic process	1.15E-02
119	GO:0006468: protein phosphorylation	1.16E-02
120	GO:0009704: de-etiolation	1.23E-02
121	GO:0055075: potassium ion homeostasis	1.23E-02
122	GO:0000105: histidine biosynthetic process	1.23E-02
123	GO:0010583: response to cyclopentenone	1.23E-02
124	GO:0006402: mRNA catabolic process	1.23E-02
125	GO:0010439: regulation of glucosinolate biosynthetic process	1.23E-02
126	GO:0009819: drought recovery	1.23E-02
127	GO:0006605: protein targeting	1.23E-02
128	GO:1901657: glycosyl compound metabolic process	1.31E-02
129	GO:0010252: auxin homeostasis	1.40E-02
130	GO:0006526: arginine biosynthetic process	1.41E-02
131	GO:0010099: regulation of photomorphogenesis	1.41E-02
132	GO:0015996: chlorophyll catabolic process	1.41E-02
133	GO:0007186: G-protein coupled receptor signaling pathway	1.41E-02
134	GO:0010100: negative regulation of photomorphogenesis	1.41E-02
135	GO:0010497: plasmodesmata-mediated intercellular transport	1.41E-02
136	GO:0006783: heme biosynthetic process	1.61E-02
137	GO:0048507: meristem development	1.61E-02
138	GO:0051865: protein autoubiquitination	1.61E-02
139	GO:0010206: photosystem II repair	1.61E-02
140	GO:0031425: chloroplast RNA processing	1.81E-02
141	GO:0009098: leucine biosynthetic process	1.81E-02
142	GO:2000280: regulation of root development	1.81E-02
143	GO:0048573: photoperiodism, flowering	1.97E-02
144	GO:0015995: chlorophyll biosynthetic process	1.97E-02
145	GO:0009641: shade avoidance	2.02E-02
146	GO:0006949: syncytium formation	2.02E-02
147	GO:0010162: seed dormancy process	2.02E-02
148	GO:0048366: leaf development	2.22E-02
149	GO:0048229: gametophyte development	2.24E-02
150	GO:0010015: root morphogenesis	2.24E-02
151	GO:0000038: very long-chain fatty acid metabolic process	2.24E-02
152	GO:0009773: photosynthetic electron transport in photosystem I	2.24E-02
153	GO:0009073: aromatic amino acid family biosynthetic process	2.24E-02
154	GO:0009682: induced systemic resistance	2.24E-02
155	GO:0045037: protein import into chloroplast stroma	2.47E-02
156	GO:0010582: floral meristem determinacy	2.47E-02
157	GO:0012501: programmed cell death	2.47E-02
158	GO:0015706: nitrate transport	2.47E-02
159	GO:0010105: negative regulation of ethylene-activated signaling pathway	2.47E-02
160	GO:0048527: lateral root development	2.53E-02
161	GO:0006865: amino acid transport	2.65E-02
162	GO:0009785: blue light signaling pathway	2.70E-02
163	GO:0006006: glucose metabolic process	2.70E-02
164	GO:0009691: cytokinin biosynthetic process	2.70E-02
165	GO:2000028: regulation of photoperiodism, flowering	2.70E-02
166	GO:0010075: regulation of meristem growth	2.70E-02
167	GO:0009767: photosynthetic electron transport chain	2.70E-02
168	GO:0030048: actin filament-based movement	2.70E-02
169	GO:0009867: jasmonic acid mediated signaling pathway	2.77E-02
170	GO:0009266: response to temperature stimulus	2.95E-02
171	GO:0009934: regulation of meristem structural organization	2.95E-02
172	GO:0048467: gynoecium development	2.95E-02
173	GO:0010207: photosystem II assembly	2.95E-02
174	GO:0090351: seedling development	3.20E-02
175	GO:0010030: positive regulation of seed germination	3.20E-02
176	GO:0006631: fatty acid metabolic process	3.29E-02
177	GO:0006071: glycerol metabolic process	3.46E-02
178	GO:0006833: water transport	3.46E-02
179	GO:0009451: RNA modification	3.46E-02
180	GO:0000162: tryptophan biosynthetic process	3.46E-02
181	GO:0051017: actin filament bundle assembly	3.72E-02
182	GO:0010187: negative regulation of seed germination	3.72E-02
183	GO:0005992: trehalose biosynthetic process	3.72E-02
184	GO:0009739: response to gibberellin	3.87E-02
185	GO:0007166: cell surface receptor signaling pathway	3.97E-02
186	GO:0051302: regulation of cell division	3.99E-02
187	GO:0019953: sexual reproduction	3.99E-02
188	GO:0006418: tRNA aminoacylation for protein translation	3.99E-02
189	GO:0003333: amino acid transmembrane transport	4.27E-02
190	GO:0048511: rhythmic process	4.27E-02
191	GO:0010431: seed maturation	4.27E-02
192	GO:0061077: chaperone-mediated protein folding	4.27E-02
193	GO:0048278: vesicle docking	4.27E-02
194	GO:0016114: terpenoid biosynthetic process	4.27E-02
195	GO:0006351: transcription, DNA-templated	4.52E-02
196	GO:0007005: mitochondrion organization	4.55E-02
197	GO:0031348: negative regulation of defense response	4.55E-02
198	GO:2000022: regulation of jasmonic acid mediated signaling pathway	4.55E-02
199	GO:0009625: response to insect	4.84E-02
200	GO:0010082: regulation of root meristem growth	4.84E-02
201	GO:0009693: ethylene biosynthetic process	4.84E-02
202	GO:0071215: cellular response to abscisic acid stimulus	4.84E-02
203	GO:0016567: protein ubiquitination	4.87E-02

Rank	GO Term	Adjusted P value
1	GO:0047661: amino-acid racemase activity	0.00E+00
2	GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity	0.00E+00
3	GO:0008922: long-chain fatty acid [acyl-carrier-protein] ligase activity	0.00E+00
4	GO:0005201: extracellular matrix structural constituent	0.00E+00
5	GO:0047341: fucose-1-phosphate guanylyltransferase activity	0.00E+00
6	GO:0004076: biotin synthase activity	0.00E+00
7	GO:0005363: maltose transmembrane transporter activity	0.00E+00
8	GO:0071633: dihydroceramidase activity	0.00E+00
9	GO:0050201: fucokinase activity	0.00E+00
10	GO:0052381: tRNA dimethylallyltransferase activity	6.60E-04
11	GO:0004832: valine-tRNA ligase activity	6.60E-04
12	GO:0010313: phytochrome binding	6.60E-04
13	GO:0042736: NADH kinase activity	6.60E-04
14	GO:0010012: steroid 22-alpha hydroxylase activity	6.60E-04
15	GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity	6.60E-04
16	GO:0050139: nicotinate-N-glucosyltransferase activity	6.60E-04
17	GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity	6.60E-04
18	GO:0004425: indole-3-glycerol-phosphate synthase activity	6.60E-04
19	GO:0008184: glycogen phosphorylase activity	6.60E-04
20	GO:0004828: serine-tRNA ligase activity	6.60E-04
21	GO:0004134: 4-alpha-glucanotransferase activity	6.60E-04
22	GO:0050308: sugar-phosphatase activity	6.60E-04
23	GO:0004645: phosphorylase activity	6.60E-04
24	GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity	6.60E-04
25	GO:0009374: biotin binding	6.60E-04
26	GO:0019203: carbohydrate phosphatase activity	6.60E-04
27	GO:0004176: ATP-dependent peptidase activity	7.04E-04
28	GO:0016788: hydrolase activity, acting on ester bonds	1.37E-03
29	GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity	1.42E-03
30	GO:0004362: glutathione-disulfide reductase activity	1.42E-03
31	GO:0003852: 2-isopropylmalate synthase activity	1.42E-03
32	GO:0045543: gibberellin 2-beta-dioxygenase activity	1.42E-03
33	GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity	1.42E-03
34	GO:0008493: tetracycline transporter activity	1.42E-03
35	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	2.35E-03
36	GO:0015462: ATPase-coupled protein transmembrane transporter activity	2.35E-03
37	GO:0008237: metallopeptidase activity	2.39E-03
38	GO:0052689: carboxylic ester hydrolase activity	2.49E-03
39	GO:0016413: O-acetyltransferase activity	2.58E-03
40	GO:0016851: magnesium chelatase activity	3.41E-03
41	GO:0001872: (1->3)-beta-D-glucan binding	3.41E-03
42	GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity	3.41E-03
43	GO:0009041: uridylate kinase activity	3.41E-03
44	GO:0015238: drug transmembrane transporter activity	4.17E-03
45	GO:0046556: alpha-L-arabinofuranosidase activity	4.60E-03
46	GO:0004335: galactokinase activity	4.60E-03
47	GO:0016279: protein-lysine N-methyltransferase activity	4.60E-03
48	GO:0042936: dipeptide transporter activity	4.60E-03
49	GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed	4.60E-03
50	GO:0019199: transmembrane receptor protein kinase activity	4.60E-03
51	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	4.71E-03
52	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	5.92E-03
53	GO:0003989: acetyl-CoA carboxylase activity	5.92E-03
54	GO:0003723: RNA binding	6.14E-03
55	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	6.69E-03
56	GO:0003727: single-stranded RNA binding	7.31E-03
57	GO:2001070: starch binding	7.35E-03
58	GO:0080030: methyl indole-3-acetate esterase activity	7.35E-03
59	GO:1990714: hydroxyproline O-galactosyltransferase activity	7.35E-03
60	GO:0004709: MAP kinase kinase kinase activity	7.35E-03
61	GO:0043621: protein self-association	8.13E-03
62	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	8.89E-03
63	GO:0016832: aldehyde-lyase activity	8.89E-03
64	GO:0001085: RNA polymerase II transcription factor binding	9.27E-03
65	GO:0004674: protein serine/threonine kinase activity	1.06E-02
66	GO:0004871: signal transducer activity	1.06E-02
67	GO:0016298: lipase activity	1.13E-02
68	GO:0051015: actin filament binding	1.31E-02
69	GO:0016759: cellulose synthase activity	1.40E-02
70	GO:0003951: NAD+ kinase activity	1.41E-02
71	GO:0008173: RNA methyltransferase activity	1.41E-02
72	GO:0005200: structural constituent of cytoskeleton	1.48E-02
73	GO:0008138: protein tyrosine/serine/threonine phosphatase activity	1.61E-02
74	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	1.61E-02
75	GO:0008889: glycerophosphodiester phosphodiesterase activity	1.61E-02
76	GO:0004519: endonuclease activity	1.63E-02
77	GO:0005524: ATP binding	1.67E-02
78	GO:0003700: transcription factor activity, sequence-specific DNA binding	1.71E-02
79	GO:0102483: scopolin beta-glucosidase activity	1.97E-02
80	GO:0004805: trehalose-phosphatase activity	2.02E-02
81	GO:0044183: protein binding involved in protein folding	2.24E-02
82	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	2.33E-02
83	GO:0004222: metalloendopeptidase activity	2.41E-02
84	GO:0000976: transcription regulatory region sequence-specific DNA binding	2.47E-02
85	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	2.53E-02
86	GO:0005215: transporter activity	2.61E-02
87	GO:0003725: double-stranded RNA binding	2.70E-02
88	GO:0008266: poly(U) RNA binding	2.95E-02
89	GO:0003774: motor activity	2.95E-02
90	GO:0008422: beta-glucosidase activity	3.03E-02
91	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	3.08E-02
92	GO:0015297: antiporter activity	3.18E-02
93	GO:0004190: aspartic-type endopeptidase activity	3.20E-02
94	GO:0003712: transcription cofactor activity	3.20E-02
95	GO:0008146: sulfotransferase activity	3.20E-02
96	GO:0042803: protein homodimerization activity	3.35E-02
97	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	3.46E-02
98	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	3.46E-02
99	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	3.46E-02
100	GO:0031418: L-ascorbic acid binding	3.72E-02
101	GO:0005528: FK506 binding	3.72E-02
102	GO:0005345: purine nucleobase transmembrane transporter activity	3.99E-02
103	GO:0003964: RNA-directed DNA polymerase activity	4.27E-02
104	GO:0008408: 3'-5' exonuclease activity	4.27E-02
105	GO:0010333: terpene synthase activity	4.27E-02
106	GO:0004707: MAP kinase activity	4.27E-02
107	GO:0033612: receptor serine/threonine kinase binding	4.27E-02
108	GO:0004672: protein kinase activity	4.60E-02
109	GO:0009055: electron carrier activity	4.69E-02

Rank	GO Term	Adjusted P value
1	GO:0009534: chloroplast thylakoid	2.71E-04
2	GO:0000796: condensin complex	6.60E-04
3	GO:0009570: chloroplast stroma	7.57E-04
4	GO:0000427: plastid-encoded plastid RNA polymerase complex	1.42E-03
5	GO:0009941: chloroplast envelope	2.05E-03
6	GO:0030139: endocytic vesicle	2.35E-03
7	GO:0009317: acetyl-CoA carboxylase complex	2.35E-03
8	GO:0009528: plastid inner membrane	2.35E-03
9	GO:0019897: extrinsic component of plasma membrane	2.35E-03
10	GO:0010007: magnesium chelatase complex	2.35E-03
11	GO:0009507: chloroplast	2.46E-03
12	GO:0009508: plastid chromosome	2.94E-03
13	GO:0032585: multivesicular body membrane	3.41E-03
14	GO:0009544: chloroplast ATP synthase complex	4.60E-03
15	GO:0009527: plastid outer membrane	4.60E-03
16	GO:0009654: photosystem II oxygen evolving complex	5.10E-03
17	GO:0015629: actin cytoskeleton	6.72E-03
18	GO:0005886: plasma membrane	9.62E-03
19	GO:0009986: cell surface	1.05E-02
20	GO:0019898: extrinsic component of membrane	1.07E-02
21	GO:0048226: Casparian strip	1.23E-02
22	GO:0009501: amyloplast	1.23E-02
23	GO:0010319: stromule	1.48E-02
24	GO:0009295: nucleoid	1.48E-02
25	GO:0010494: cytoplasmic stress granule	1.61E-02
26	GO:0030529: intracellular ribonucleoprotein complex	1.67E-02
27	GO:0005667: transcription factor complex	1.87E-02
28	GO:0000418: DNA-directed RNA polymerase IV complex	2.02E-02
29	GO:0016459: myosin complex	2.02E-02
30	GO:0005884: actin filament	2.24E-02
31	GO:0090404: pollen tube tip	2.24E-02
32	GO:0009543: chloroplast thylakoid lumen	2.25E-02
33	GO:0005578: proteinaceous extracellular matrix	2.70E-02
34	GO:0030095: chloroplast photosystem II	2.95E-02
35	GO:0031977: thylakoid lumen	3.29E-02
36	GO:0005856: cytoskeleton	4.01E-02
37	GO:0009532: plastid stroma	4.27E-02
38	GO:0046658: anchored component of plasma membrane	4.75E-02