gene detail

Gene description

TAIR ID: AT1G10470

Short description: response regulator 4

Pathogen responsiveness: -0.64

General responsiveness: -0.19

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

response to cytokinin, cytokinin-activated signaling pathway, red or far-red light signaling pathway, regulation of transcription, DNA-templated, protein autophosphorylation, embryo development ending in seed dormancy, regulation of circadian rhythm, phosphorelay signal transduction system, transcription, circadian rhythm, response to red light

GO cellular component

nucleus, cytoplasm

GO molecular function

protein binding, protein serine/threonine kinase activity, phosphorelay response regulator activity

Protein domain

Pfam	PF00072, Response regulator receiver domain
SMART	SM00448, REC

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath04075: Plant hormone signal transduction

Transcriptional regulation

Regulator:
AT5G13790, AT1G24260

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 12 (Top20%)

click to view PPI network

Coexpression network

GSE13739_EDS16_GO view
GSE56094_WT_PSTDC3000 view

Differentially expressed condition

15 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17464	Laer, control	Laer, Alternaria brassicicola 3 d	1.60	1.75E-05
GSE17464	Laer, control	Laer, PstDC3000 12 h	1.68	7.99E-06
GSE17464	Penta, control	Penta, PstDC3000 12 h	1.52	3.62E-05
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	-1.73	5.31E-04
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-1.82	6.64E-08
GSE26206	Col, WT, control	Col, WT, R.solani_AG8 7 d	-1.53	2.68E-07
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	-2.33	2.60E-11
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-1.69	3.01E-09
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	-1.64	3.29E-09
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	-1.76	4.55E-13
GSE56094	Col, WT, control 11 h	Col, WT, PstDC3000 11 h	-1.67	9.87E-12
GSE56094	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	-2.12	4.41E-16
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	-2.20	1.83E-17
GSE5616	Col, WT, water 6 h	Col, WT, P. infestans 6 h	-1.80	3.04E-05
GSE6556	Col, gh3.5, control	Col, gh3.5, PstDC3000 AvrRpt2 48 h	-1.67	1.68E-04