co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G10470

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0060966: regulation of gene silencing by RNA	0.00E+00
2	GO:0070829: heterochromatin maintenance	0.00E+00
3	GO:0071360: cellular response to exogenous dsRNA	0.00E+00
4	GO:1900370: positive regulation of RNA interference	0.00E+00
5	GO:0035563: positive regulation of chromatin binding	0.00E+00
6	GO:0042759: long-chain fatty acid biosynthetic process	1.30E-05
7	GO:1900368: regulation of RNA interference	1.30E-05
8	GO:1900111: positive regulation of histone H3-K9 dimethylation	3.42E-05
9	GO:0010623: programmed cell death involved in cell development	6.16E-05
10	GO:0032776: DNA methylation on cytosine	6.16E-05
11	GO:0060968: regulation of gene silencing	6.16E-05
12	GO:0060964: regulation of gene silencing by miRNA	9.36E-05
13	GO:0009697: salicylic acid biosynthetic process	1.68E-04
14	GO:0003006: developmental process involved in reproduction	2.10E-04
15	GO:0042372: phylloquinone biosynthetic process	2.53E-04
16	GO:0030422: production of siRNA involved in RNA interference	5.49E-04
17	GO:0016024: CDP-diacylglycerol biosynthetic process	6.58E-04
18	GO:0007166: cell surface receptor signaling pathway	6.80E-04
19	GO:0010143: cutin biosynthetic process	7.72E-04
20	GO:0080188: RNA-directed DNA methylation	8.32E-04
21	GO:0010025: wax biosynthetic process	8.91E-04
22	GO:0016998: cell wall macromolecule catabolic process	1.08E-03
23	GO:0006306: DNA methylation	1.08E-03
24	GO:0030245: cellulose catabolic process	1.14E-03
25	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.15E-03
26	GO:0040007: growth	1.21E-03
27	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	1.21E-03
28	GO:0080022: primary root development	1.41E-03
29	GO:0009958: positive gravitropism	1.48E-03
30	GO:0016032: viral process	1.78E-03
31	GO:0006468: protein phosphorylation	1.84E-03
32	GO:0009828: plant-type cell wall loosening	1.94E-03
33	GO:0009627: systemic acquired resistance	2.35E-03
34	GO:0010411: xyloglucan metabolic process	2.43E-03
35	GO:0010311: lateral root formation	2.69E-03
36	GO:0042546: cell wall biogenesis	3.73E-03
37	GO:0009664: plant-type cell wall organization	4.23E-03
38	GO:0051603: proteolysis involved in cellular protein catabolic process	4.55E-03
39	GO:0009624: response to nematode	5.66E-03
40	GO:0071555: cell wall organization	5.68E-03
41	GO:0009742: brassinosteroid mediated signaling pathway	5.89E-03
42	GO:0009058: biosynthetic process	6.85E-03
43	GO:0045490: pectin catabolic process	8.26E-03
44	GO:0009451: RNA modification	8.40E-03
45	GO:0009826: unidimensional cell growth	1.09E-02
46	GO:0015979: photosynthesis	1.43E-02
47	GO:0016042: lipid catabolic process	1.69E-02
48	GO:0006952: defense response	3.17E-02
49	GO:0009414: response to water deprivation	4.21E-02

Rank	GO Term	Adjusted P value
1	GO:0008909: isochorismate synthase activity	1.30E-05
2	GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity	1.30E-05
3	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	2.10E-04
4	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	2.10E-04
5	GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity	5.49E-04
6	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	5.60E-04
7	GO:0005528: FK506 binding	9.51E-04
8	GO:0030570: pectate lyase activity	1.21E-03
9	GO:0008810: cellulase activity	1.21E-03
10	GO:0016762: xyloglucan:xyloglucosyl transferase activity	1.70E-03
11	GO:0004197: cysteine-type endopeptidase activity	1.78E-03
12	GO:0016791: phosphatase activity	1.94E-03
13	GO:0016798: hydrolase activity, acting on glycosyl bonds	2.43E-03
14	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	3.71E-03
15	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	4.03E-03
16	GO:0008234: cysteine-type peptidase activity	4.76E-03
17	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	5.09E-03
18	GO:0016746: transferase activity, transferring acyl groups	5.77E-03
19	GO:0004386: helicase activity	6.01E-03
20	GO:0005524: ATP binding	6.83E-03
21	GO:0016829: lyase activity	6.98E-03
22	GO:0004672: protein kinase activity	8.33E-03
23	GO:0016788: hydrolase activity, acting on ester bonds	1.14E-02
24	GO:0052689: carboxylic ester hydrolase activity	1.40E-02
25	GO:0004519: endonuclease activity	1.83E-02
26	GO:0016301: kinase activity	2.50E-02
27	GO:0004674: protein serine/threonine kinase activity	2.81E-02
28	GO:0016740: transferase activity	2.99E-02
29	GO:0030246: carbohydrate binding	3.20E-02
30	GO:0005509: calcium ion binding	4.05E-02

Rank	GO Term	Adjusted P value
1	GO:0090577: RNA polymerase IV transcription factor complex	0.00E+00
2	GO:0031618: nuclear pericentric heterochromatin	0.00E+00
3	GO:0005576: extracellular region	1.75E-04
4	GO:0009543: chloroplast thylakoid lumen	4.38E-04
5	GO:0005618: cell wall	6.76E-04
6	GO:0005578: proteinaceous extracellular matrix	7.14E-04
7	GO:0005764: lysosome	7.72E-04
8	GO:0000419: DNA-directed RNA polymerase V complex	8.91E-04
9	GO:0009654: photosystem II oxygen evolving complex	1.01E-03
10	GO:0019898: extrinsic component of membrane	1.63E-03
11	GO:0000325: plant-type vacuole	2.87E-03
12	GO:0031977: thylakoid lumen	3.43E-03
13	GO:0048046: apoplast	3.59E-03
14	GO:0009505: plant-type cell wall	7.11E-03
15	GO:0005615: extracellular space	8.93E-03
16	GO:0043231: intracellular membrane-bounded organelle	1.85E-02
17	GO:0009579: thylakoid	2.94E-02
18	GO:0009534: chloroplast thylakoid	2.96E-02
19	GO:0009536: plastid	4.95E-02