gene detail

Gene description

TAIR ID: AT1G07170

Short description: PHF5-like protein

Pathogen responsiveness: -1.66

General responsiveness: -1.11

Orthologous

Rice:

Maize:

Wheat:

GO biological process

mRNA splicing, via spliceosome

GO cellular component

nucleus, U12-type spliceosomal complex

GO molecular function

molecular_function

Protein domain

Pfam	PF03660, PHF5-like protein

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath03040: Spliceosome

Transcriptional regulation

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

Differentially expressed condition

5 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE11807	Col, WT, water 4 h	Col, WT, Flg22 4 h	2.06	1.49E-02
GSE26679	Col, WT, GC 0 h	Col, WT, GC 18 h	1.95	2.99E-10
GSE26679	Col, WT, GC 0 h	Col, WT, GC 36 h	1.89	4.30E-10
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 18 h	2.07	8.53E-11
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	2.28	8.56E-12