gene detail

Gene description

TAIR ID: AT1G05710

Short description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Pathogen responsiveness: 0.34

General responsiveness: 0.20

Orthologous

Rice:

OS04G0493100

Maize:

GRMZM2G089596

Wheat: No orthologous gene

GO biological process

regulation of transcription, DNA-templated, response to ethylene, transcription

GO cellular component

nucleus

GO molecular function

DNA binding, protein binding, transcription factor activity, sequence-specific DNA binding, protein dimerization activity

Protein domain

No domain annotation

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790, AT1G24260, AT2G43010

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 7

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE26679_WT_GC  view
GSE56094_WT_HRPA-  view
GSE13739_EDS16_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view
GSE26679_EDR1_GC  view

Differentially expressed condition

27 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE11807	Col, WT, water 4 h	Col, WT, Flg22 4 h	1.95	8.06E-03
GSE17464	Laer, control	Laer, Alternaria brassicicola 3 d	-1.62	9.73E-06
GSE17464	Laer, control	Laer, Flg22 1 h	1.54	2.44E-05
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	2.58	1.08E-08
GSE26679	Col, WT, GC 0 h	Col, WT, GC 18 h	2.15	1.19E-08
GSE26679	Col, WT, GC 0 h	Col, WT, GC 36 h	2.33	2.27E-09
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 18 h	2.17	8.43E-09
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	2.41	7.55E-10
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	3.08	9.79E-16
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	2.55	6.97E-14
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	2.71	6.79E-15
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	4.03	4.90E-17
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	2.75	4.28E-15
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	2.81	2.56E-15
GSE45214	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	2.43	4.05E-13
GSE45214	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	3.03	5.44E-14
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	3.17	4.23E-15
GSE45214	Col, npr1, PstDC3000 AvrRpt2 0 h	Col, npr1, PstDC3000 AvrRpt2 4 h	2.54	3.53E-13
GSE50526	Col, WT, mock 24 h	Col, WT, A. brassicicola 24 h	2.15	6.06E-03
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	1.93	3.95E-05
GSE5520	Col, WT, control 10 h	Col, WT, Cor- hrpS- 10 h	1.50	8.43E-03
GSE5615	Col, WT, GST 4 h	Col, WT, GST+NPP1 4 h	1.53	7.50E-05
GSE5615	Col, WT, water 4 h	Col, WT, HrpZ 4 h	2.20	6.25E-08
GSE5616	Col, WT, water 12 h	Col, WT, P. infestans 12 h	1.53	1.75E-06
GSE5616	Col, WT, water 6 h	Col, WT, P. infestans 6 h	1.63	3.06E-07
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	2.17	3.49E-02
GSE6556	Col, gh3.5, control	Col, gh3.5, PstDC3000 AvrRpt2 48 h	1.50	2.90E-03