gene detail

Gene description

TAIR ID: AT1G05700

Short description: Leucine-rich repeat transmembrane protein kinase protein

Pathogen responsiveness: -0.76

General responsiveness: 0.55

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

protein phosphorylation, phosphorylation

GO cellular component

integral component of membrane, plasma membrane

GO molecular function

ATP binding, protein kinase activity, protein serine/threonine kinase activity, kinase activity

Protein domain

Pfam	PF12819, Carbohydrate-binding protein of the ER
Pfam	PF13855, Leucine rich repeat
Pfam	PF00069, Protein kinase domain
SMART	SM00220, S_TKc

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790, AT1G24260, AT2G43010

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 10 (Top20%)

click to view PPI network

Coexpression network

No coexpression gene

Differentially expressed condition

7 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_24 h	3.05	2.01E-11
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_24 h	3.15	1.15E-11
GSE5520	Col, WT, control 7 h	Col, WT, E.coli_0157_H7 7 h	2.75	4.23E-02
GSE5520	Col, WT, control 7 h	Col, WT, E.coli_TUV86 flic- 7 h	3.12	9.52E-03
GSE5615	Col, WT, water 4 h	Col, WT, Flg22 4 h	2.12	2.76E-07
GSE62537	Col, WT, control 48 h	Col, WT, V.longisporum 48 h	1.75	4.64E-03
GSE62537	Col, ndr1, control 48 h	Col, ndr1, V.longisporum 48 h	1.91	2.12E-03