gene detail

Gene description

TAIR ID: AT1G04550

Short description: AUX/IAA transcriptional regulator family protein

Pathogen responsiveness: -0.57

General responsiveness: -1.27

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

auxin-activated signaling pathway, response to auxin, regulation of transcription, DNA-templated, negative regulation of transcription, transcription, xylem and phloem pattern formation, root development, embryonic pattern specification

GO cellular component

nucleus

GO molecular function

transcription factor activity, sequence-specific DNA binding, protein binding

Protein domain

Pfam	PF02309, AUX/IAA family

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath04075: Plant hormone signal transduction

Transcriptional regulation

Regulator:
AT5G11590, AT1G19850

Target:
AT5G12870

Protein-protein interaction network

The number of partners (degree) is: 36 (Top5%)

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE56094_WT_HRPA-  view
GSE13739_EDS16_GO  view
GSE26679_EDR1_GC  view

Differentially expressed condition

11 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17464	Laer, JA+Flg22 0 h	Laer, JA+Flg22 2 h	-1.92	9.00E-03
GSE17464	Laer, control	Laer, Flg22 2 h	-1.85	5.93E-03
GSE17464	Penta, control	Penta, Flg22 2 h	-2.37	4.97E-04
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-2.46	3.34E-09
GSE45214	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-1.60	9.63E-11
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	-1.89	2.51E-12
GSE50526	Col, WT, mock 9 h	Col, WT, A. brassicicola 9 h	-1.51	2.84E-02
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_2 h	-1.63	1.79E-07
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	-1.75	2.20E-05
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	-1.72	1.06E-13
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	-2.25	1.50E-03