Gene: AT1G04360
     

Gene description


TAIR ID: AT1G04360

Short description: RING/U-box superfamily protein

Pathogen responsiveness: -1.57

General responsiveness: -0.20

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G056786  

Wheat:

TA.5203.1.A1_AT  


GO biological process


protein ubiquitination, proteasome-mediated ubiquitin-dependent protein catabolic process


GO cellular component


nucleus, integral component of membrane


GO molecular function


ubiquitin protein ligase activity, metal ion binding


Protein domain


PfamPF13639, Ring finger domain
SMARTSM00184, RING

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT2G20180

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 9 (Top20%)

click to view PPI network

Differentially expressed condition


5 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE40544Col, WT, controlCol, WT, PstDC3000 EV-1.532.43E-03
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 EV-1.555.30E-03
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-2.053.37E-12
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-1.611.49E-10
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-1.871.44E-07






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