gene detail

Gene description

TAIR ID: AT1G04130

Short description: Tetratricopeptide repeat (TPR)-like superfamily protein

Pathogen responsiveness: -1.98

General responsiveness: -0.43

Orthologous

Rice:

OS03G0750100

Maize:

GRMZM2G146000

Wheat:

TA.5973.1.S1_AT

GO biological process

unkown

GO cellular component

cytoplasm

GO molecular function

unkown

Protein domain

Pfam	PF13181, Tetratricopeptide repeat
SMART	SM00028, TPR

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790, AT3G15270, AT2G47070, AT1G24260, AT1G53160, AT2G20180, AT4G36990

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 1

click to view PPI network

Coexpression network

GSE26679_WT_GC  view
GSE13739_EDS16_GO  view
GSE26679_EDR1_GC  view

Differentially expressed condition

3 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.82	4.28E-03
GSE9674	Ws-4, AtMYB30 ox, control	Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 90-105 min	1.86	4.35E-02
GSE9674	Ws-4, WT, control	Ws-4, WT, Xanthomonas strain Xcc147 90-105 min	1.90	1.21E-02