Prob id: TAAFFX.12124.1.S1_AT
     

Gene name


TRIAE_CS42_2AL_TGACv1_095565_AA0312150

Gene description


DNA ligase 4 [Source:Projected from Arabidopsis thaliana (AT5G57160) UniProtKB/Swiss-Prot;Acc:Q9LL84]


Orthologous


Arabidopsis:

AT5G57160  

Rice: No orthologous
Maize: No orthologous

GO biological process


DNA replication, DNA repair, double-strand break repair, double-strand break repair via nonhomologous end joining, DNA recombination, cellular response to DNA damage stimulus, response to X-ray, DNA ligation involved in DNA repair, DNA biosynthetic process


GO cellular component


plasmodesma, apoplast


GO molecular function


nucleotide binding, DNA binding, DNA ligase activity, DNA ligase (ATP) activity, ATP binding, ligase activity


Protein domain


PfamPF16589, BRCT domain, a BRCA1 C-terminus domain
PfamPF01068, ATP dependent DNA ligase domain
PfamPF04679, ATP dependent DNA ligase C terminal region
PfamPF11411, DNA ligase IV
PfamPF04675, DNA ligase N terminus
SMARTSM00292, BRCT

Differentially expressed condition


2 conditions

SeriesControlTreatmentLog2FCAdj. P value
GSE27320Line 8866, Erysiphe graminis f. sp. tritici 0 hLine 8866, Erysiphe graminis f. sp. tritici 12 h2.475.59E-03
GSE32151Lr, Puccinia triticina 0 hLr, Puccinia triticina 24 h1.813.17E-09






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