Prob id: TA.491.1.S1_AT
Gene name
TRIAE_CS42_5DL_TGACv1_433011_AA1398000
Gene description
DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Source:Projected from Arabidopsis thaliana (AT5G26742) UniProtKB/Swiss-Prot;Acc:Q8L7S8]
GO biological process
Group II intron splicing, response to salt stress, chloroplast organization, ribosome biogenesis
GO cellular component
nucleus, chloroplast, chloroplast stroma, chloroplast envelope, membrane
GO molecular function
nucleic acid binding, RNA binding, mRNA binding, helicase activity, ATP binding, zinc ion binding
Protein domain
| Pfam | PF00270, DEAD/DEAH box helicase |
| Pfam | PF08152, GUCT (NUC152) domain |
| Pfam | PF00098, Zinc knuckle |
| Pfam | PF00271, Helicase conserved C-terminal domain |
| SMART | SM00343, ZnF_C2HC |
| SMART | SM00487, DEXDc |
| SMART | SM00490, HELICc |
Differentially expressed condition 
7 conditions
| Series | Control | Treatment | Log2FC | Adj. P value |
|---|---|---|---|---|
| GSE32151 | Lr, Puccinia triticina 0 h | Lr, Puccinia triticina 24 h | -2.35 | 8.16E-08 |
| GSE32151 | Lr, Puccinia triticina 0 h | Lr, Puccinia triticina 6 h | -2.16 | 2.50E-07 |
| GSE36283 | Roblin, water 4 d | Roblin, Fusarium graminearum 4 d | -1.80 | 4.65E-03 |
| GSE54550 | Line2_2890, water 4 d, by point | Line2_2890, Fusarium graminearum 4 d, by point | -2.64 | 5.53E-14 |
| GSE54554 | Roblin, water 2 d | Roblin, Fusarium graminearum strain GZ3639 2 d | -2.07 | 6.83E-07 |
| GSE54554 | Roblin, water 4 d | Roblin, Fusarium graminearum strain GZ3639 4 d | -1.77 | 2.73E-06 |
| GSE54555 | Line2890, water 4 d | Line2890, Fusarium graminearum 4 d | -2.28 | 4.11E-03 |
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