Prob id: TA.10155.1.A1_AT
     

Gene name


TRIAE_CS42_U_TGACv1_643701_AA2134410

Gene description


Endoribonuclease Dicer homolog 3 [Source:Projected from Arabidopsis thaliana (AT3G43920) UniProtKB/Swiss-Prot;Acc:Q9LXW7]


Orthologous


Arabidopsis:

AT3G43920  

Rice:

OS01G0909200  

Maize:

GRMZM2G413853  


GO biological process


RNA processing, maintenance of DNA methylation, production of ta-siRNAs involved in RNA interference, production of siRNA involved in RNA interference, gene silencing by RNA, RNA virus induced gene silencing, defense response to virus, RNA phosphodiester bond hydrolysis, RNA phosphodiester bond hydrolysis, endonucleolytic


GO cellular component


nucleus, nucleolus


GO molecular function


nucleic acid binding, DNA binding, RNA binding, double-stranded RNA binding, ribonuclease III activity, protein binding, ATP binding, hydrolase activity, endoribonuclease activity, producing 5'-phosphomonoesters


Protein domain


PfamPF00271, Helicase conserved C-terminal domain
PfamPF04851, Type III restriction enzyme, res subunit
PfamPF03368, Dicer dimerisation domain
PfamPF02170, PAZ domain
PfamPF00636, Ribonuclease III domain
SMARTSM00358, DSRM
SMARTSM00535, RIBOc
SMARTSM00487, DEXDc
SMARTSM00949, PAZ
SMARTSM00490, HELICc

Differentially expressed condition


3 conditions

SeriesControlTreatmentLog2FCAdj. P value
GSE54550Line2_2618, water 4 d, by pointLine2_2618, Fusarium graminearum 4 d, by point-1.761.24E-08
GSE54550Line2_2890, water 4 d, by pointLine2_2890, Fusarium graminearum 4 d, by point-1.957.67E-10
GSE54555Line2890, water 4 dLine2890, Fusarium graminearum 4 d-2.176.46E-05






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