gene detail

Gene description

RAP-DB: OS01G0909200

Short description: DEAD-like helicase, N-terminal domain containing protein.

Orthologous

Arabidopsis:

AT3G43920

Maize: No orthologous

Wheat:

TA.10155.1.A1_AT TA.10155.2.S1_AT

GO biological process

RNA processing (GO:0006396)

GO cellular component

unknown

GO molecular function

nucleic acid binding (GO:0003676), DNA binding (GO:0003677), RNA binding (GO:0003723), helicase activity (GO:0004386), ribonuclease III activity (GO:0004525), protein binding (GO:0005515), ATP binding (GO:0005524), hydrolase activity (GO:0016787), endoribonuclease activity, producing 5'-phosphomonoesters (GO:0016891)

Protein domain

Pfam	PF00271, Helicase conserved C-terminal domain
Pfam	PF03368, Dicer dimerisation domain
Pfam	PF02170, PAZ domain
Pfam	PF04851, Type III restriction enzyme, res subunit
Pfam	PF00636, Ribonuclease III domain
SMART	SM00487, DEXDc
SMART	SM00949, PAZ
SMART	SM00490, HELICc
SMART	SM00535, RIBOc

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Coexpression network

GSE62894_S_77  view
GSE63047_T7174R  view
GSE33411_IRBB5  view
GSE62893_S_15B  view
GSE62895_R_15B_ROOT  view
GSE62894_R_77  view
GSE63047_DELTAHRCV  view

Differentially expressed condition

4 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE62894	Nipponbare, pish, water 5 d	Nipponbare, pish, Magnaporthe oryzae Kyu77-07A 5 d	-4.55	5.55E-11
GSE62895	Nipponbare, Pia, water 3 d	Nipponbare, Pia, Magnaporthe oryzae P91-15B 3 d	-2.87	1.10E-02
GSE62895	Nipponbare, Pia, water 5 d	Nipponbare, Pia, Magnaporthe oryzae P91-15B 5 d	-2.73	2.40E-02
GSE62895	Nipponbare, pia, water 3 d	Nipponbare, pia, Magnaporthe oryzae P91-15B 3 d	-2.78	1.28E-02