gene detail

Gene description

RAP-DB: OS09G0520700

Short description: Similar to RNA helicase.

Orthologous

Arabidopsis:

AT5G62190

Maize:

GRMZM2G149520

Wheat:

TA.14517.1.S1_AT

GO biological process

unknown

GO cellular component

nucleus (GO:0005634)

GO molecular function

nucleic acid binding (GO:0003676), RNA binding (GO:0003723), helicase activity (GO:0004386), ATP binding (GO:0005524), ATP-dependent helicase activity (GO:0008026)

Protein domain

Pfam	PF08152, GUCT (NUC152) domain
Pfam	PF00271, Helicase conserved C-terminal domain
Pfam	PF00270, DEAD/DEAH box helicase
SMART	SM00487, DEXDc
SMART	SM00490, HELICc

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Coexpression network

GSE33411_IRBB7  view
GSE63047_T7174R  view
GSE33411_IRBB5  view
GSE16793_XOO  view
GSE16793_XOC  view
GSE63047_DELTAHRCV  view
GSE33411_IR24  view

Differentially expressed condition

16 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE33411	IR24, control	IR24, Xanthomonas oryzae pv. oryzae 12 h	1.59	1.58E-07
GSE33411	IR24, control	IR24, Xanthomonas oryzae pv. oryzae 3 h	1.82	1.71E-08
GSE33411	IRBB5, control	IRBB5, Xanthomonas oryzae pv. oryzae 12 h	1.57	2.05E-07
GSE33411	IRBB5, control	IRBB5, Xanthomonas oryzae pv. oryzae 3 h	1.60	1.99E-07
GSE33411	IRBB7, control	IRBB7, Xanthomonas oryzae pv. oryzae 12 h	1.72	3.47E-08
GSE33411	IRBB7, control	IRBB7, Xanthomonas oryzae pv. oryzae 6 h	1.61	5.83E-07
GSE33411	IRBB7, control	IRBB7, Xanthomonas oryzae pv. oryzae 3 h	1.70	6.29E-08
GSE62893	Nipponbare, pia, water 3 d	Nipponbare, pia, Magnaporthe oryzae P91-15B 3 d	2.11	3.35E-02
GSE62894	Nipponbare, Pish, water 2 d	Nipponbare, Pish, Magnaporthe oryzae Kyu77-07A 2 d	1.95	3.08E-03
GSE62894	Nipponbare, Pish, water 3 d	Nipponbare, Pish, Magnaporthe oryzae Kyu77-07A 3 d	1.91	3.86E-03
GSE62894	Nipponbare, pish, water 3 d	Nipponbare, pish, Magnaporthe oryzae Kyu77-07A 3 d	2.61	1.31E-04
GSE62895	Nipponbare, Pia, water 3 d	Nipponbare, Pia, Magnaporthe oryzae P91-15B 3 d	-1.89	3.12E-02
GSE62895	Nipponbare, Pia, water 5 d	Nipponbare, Pia, Magnaporthe oryzae P91-15B 5 d	-2.30	1.88E-02
GSE62895	Nipponbare, pia, water 3 d	Nipponbare, pia, Magnaporthe oryzae P91-15B 3 d	-1.97	2.44E-02
GSE62895	Nipponbare, pia, water 5 d	Nipponbare, pia, Magnaporthe oryzae P91-15B 5 d	-2.72	4.66E-03
GSE7256	Nipponbare, Mock 4 d	Nipponbare, Magnaporthe grisea FR13 5 d	2.50	1.06E-03