gene detail

Gene description

RAP-DB: OS08G0295300

Short description: Similar to Threonyl-tRNA synthetase, cytoplasmic (EC 6.1.1.3) (Threonine--tRNA ligase) (ThrRS).

Orthologous

Arabidopsis:

AT2G04842

Maize:

GRMZM2G553314

Wheat: No orthologous

GO biological process

tRNA aminoacylation for protein translation (GO:0006418), threonyl-tRNA aminoacylation (GO:0006435), tRNA aminoacylation (GO:0043039)

GO cellular component

cytoplasm (GO:0005737)

GO molecular function

nucleotide binding (GO:0000166), aminoacyl-tRNA ligase activity (GO:0004812), threonine-tRNA ligase activity (GO:0004829), ATP binding (GO:0005524), ligase activity, forming aminoacyl-tRNA and related compounds (GO:0016876)

Protein domain

Pfam	PF03129, Anticodon binding domain
Pfam	PF07973, Threonyl and Alanyl tRNA synthetase second additional domain
Pfam	PF00587, tRNA synthetase class II core domain (G, H, P, S and T)
Pfam	PF02824, TGS domain
SMART	SM00863, tRNA_SAD

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:dosa00970: Aminoacyl-tRNA biosynthesis

Coexpression network

GSE63047_T7174R  view
GSE33411_IRBB5  view
GSE16793_XOO  view
GSE16793_XOC  view
GSE62894_S_77  view
GSE33411_IRBB7  view
GSE62893_R_15B  view
GSE62895_R_15B_ROOT  view
GSE62894_R_77  view
GSE63047_DELTAHRCV  view
GSE33411_IR24  view

Differentially expressed condition

14 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE33411	IR24, control	IR24, Xanthomonas oryzae pv. oryzae 12 h	1.77	9.60E-09
GSE33411	IR24, control	IR24, Xanthomonas oryzae pv. oryzae 3 h	1.51	2.79E-07
GSE33411	IRBB5, control	IRBB5, Xanthomonas oryzae pv. oryzae 12 h	1.51	2.07E-07
GSE33411	IRBB7, control	IRBB7, Xanthomonas oryzae pv. oryzae 12 h	1.80	6.29E-09
GSE62893	Nipponbare, Pia, water 2 d	Nipponbare, Pia, Magnaporthe oryzae P91-15B 2 d	2.20	2.08E-02
GSE62893	Nipponbare, pia, water 3 d	Nipponbare, pia, Magnaporthe oryzae P91-15B 3 d	2.54	8.85E-03
GSE62894	Nipponbare, Pish, water 2 d	Nipponbare, Pish, Magnaporthe oryzae Kyu77-07A 2 d	2.18	1.12E-04
GSE62894	Nipponbare, Pish, water 3 d	Nipponbare, Pish, Magnaporthe oryzae Kyu77-07A 3 d	1.63	2.99E-03
GSE62894	Nipponbare, pish, water 2 d	Nipponbare, pish, Magnaporthe oryzae Kyu77-07A 2 d	1.69	5.25E-03
GSE62894	Nipponbare, pish, water 3 d	Nipponbare, pish, Magnaporthe oryzae Kyu77-07A 3 d	1.59	3.37E-03
GSE62894	Nipponbare, pish, water 5 d	Nipponbare, pish, Magnaporthe oryzae Kyu77-07A 5 d	-2.04	3.47E-05
GSE62895	Nipponbare, Pia, water 3 d	Nipponbare, Pia, Magnaporthe oryzae P91-15B 3 d	-3.75	7.99E-03
GSE62895	Nipponbare, Pia, water 5 d	Nipponbare, Pia, Magnaporthe oryzae P91-15B 5 d	-3.00	3.94E-02
GSE62895	Nipponbare, pia, water 3 d	Nipponbare, pia, Magnaporthe oryzae P91-15B 3 d	-2.64	4.98E-02