gene detail

Gene description

RAP-DB: OS07G0108300

Short description: Similar to Alanine aminotransferase.

Orthologous

Arabidopsis:

AT1G23310 AT1G70580

Maize:

GRMZM5G840582

Wheat: No orthologous

GO biological process

biosynthetic process (GO:0009058), 1-aminocyclopropane-1-carboxylate biosynthetic process (GO:0042218)

GO cellular component

unknown

GO molecular function

catalytic activity (GO:0003824), transferase activity, transferring nitrogenous groups (GO:0016769), 1-aminocyclopropane-1-carboxylate synthase activity (GO:0016847), pyridoxal phosphate binding (GO:0030170)

Protein domain

Pfam	PF00155, Aminotransferase class I and II

Metabolic pathway

PWY-181: photorespiration
GLYSYN-ALA-PWY: glycine biosynthesis III
ALANINE-SYN2-PWY: alanine biosynthesis II
ALACAT2-PWY: alanine degradation II (to D-lactate)
ALANINE-DEG3-PWY: alanine degradation III

KEGG pathway

PATH:dosa01200: Carbon metabolism
PATH:dosa01210: 2-Oxocarboxylic acid metabolism
PATH:dosa01230: Biosynthesis of amino acids
PATH:dosa00630: Glyoxylate and dicarboxylate metabolism
PATH:dosa00710: Carbon fixation in photosynthetic organisms
PATH:dosa00250: Alanine, aspartate and glutamate metabolism
PATH:dosa00260: Glycine, serine and threonine metabolism
PATH:dosa00220: Arginine biosynthesis

Coexpression network

GSE63047_T7174R  view
GSE33411_IRBB5  view
GSE16793_XOO  view
GSE16793_XOC  view
GSE62894_S_77  view
GSE33411_IRBB7  view
GSE62893_S_15B  view
GSE62893_R_15B  view
GSE62894_R_77  view
GSE63047_DELTAHRCV  view

Differentially expressed condition

8 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE62894	Nipponbare, Pish, water 3 d	Nipponbare, Pish, Magnaporthe oryzae Kyu77-07A 3 d	-1.58	3.38E-02
GSE62894	Nipponbare, pish, water 5 d	Nipponbare, pish, Magnaporthe oryzae Kyu77-07A 5 d	-5.94	2.74E-11
GSE62895	Nipponbare, Pia, water 2 d	Nipponbare, Pia, Magnaporthe oryzae P91-15B 2 d	-1.93	2.80E-02
GSE62895	Nipponbare, Pia, water 3 d	Nipponbare, Pia, Magnaporthe oryzae P91-15B 3 d	-2.64	8.26E-04
GSE62895	Nipponbare, Pia, water 5 d	Nipponbare, Pia, Magnaporthe oryzae P91-15B 5 d	-2.11	9.97E-03
GSE62895	Nipponbare, pia, water 3 d	Nipponbare, pia, Magnaporthe oryzae P91-15B 3 d	-2.54	1.06E-03
GSE62895	Nipponbare, pia, water 5 d	Nipponbare, pia, Magnaporthe oryzae P91-15B 5 d	-2.31	2.87E-03
GSE63047	Nipponbare, water 7 d	Nipponbare, Xanthomonas oryzae T7174R 7 d	-3.50	1.15E-11