gene detail

Gene description

TAIR ID: AT1G23310

Short description: glutamate:glyoxylate aminotransferase

Pathogen responsiveness: -2.04

General responsiveness: 2.05

Orthologous

Rice:

OS07G0108300 OS10G0390500

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

L-alanine catabolic process, glycine biosynthetic process, response to hypoxia, photorespiration

GO cellular component

peroxisome, vacuole, membrane, apoplast, cytoplasm, chloroplast

GO molecular function

glycine:2-oxoglutarate aminotransferase activity, pyridoxal phosphate binding, alanine-glyoxylate transaminase activity, L-alanine:2-oxoglutarate aminotransferase activity

Protein domain

Pfam	PF00155, Aminotransferase class I and II

Metabolic pathway

PWY-4041: γ-glutamyl cycle
PWY-181: photorespiration
GLYSYN-ALA-PWY: glycine biosynthesis III
GLYSYN2-PWY: glycine biosynthesis
ALANINE-SYN2-PWY: alanine biosynthesis II
ALACAT2-PWY: alanine degradation II (to D-lactate)
ALANINE-DEG3-PWY: alanine degradation III

KEGG pathway

PATH:ath01200: Carbon metabolism
PATH:ath01210: 2-Oxocarboxylic acid metabolism
PATH:ath01230: Biosynthesis of amino acids
PATH:ath00630: Glyoxylate and dicarboxylate metabolism
PATH:ath00710: Carbon fixation in photosynthetic organisms
PATH:ath00250: Alanine, aspartate and glutamate metabolism
PATH:ath00260: Glycine, serine and threonine metabolism
PATH:ath00220: Arginine biosynthesis

Transcriptional regulation

Regulator:
AT3G27920

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 4

click to view PPI network

Coexpression network

GSE56094_WT_HRPA- view

Differentially expressed condition

2 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	-1.86	3.00E-11
GSE56094	Col, WT, control 11 h	Col, WT, PstDC3000 11 h	-1.53	3.14E-08