Gene: OS04G0641000
     

Gene description


RAP-DB: OS04G0641000


Short description: Similar to DNA-directed RNA polymerase.

GO biological process


transcription, DNA-dependent (GO:0006351)

GO cellular component


unknown

GO molecular function


DNA binding (GO:0003677), DNA-directed RNA polymerase activity (GO:0003899), ribonucleoside binding (GO:0032549)

Protein domain


PfamPF04565, RNA polymerase Rpb2, domain 3
PfamPF04563, RNA polymerase beta subunit
PfamPF00562, RNA polymerase Rpb2, domain 6
PfamPF04566, RNA polymerase Rpb2, domain 4
PfamPF04560, RNA polymerase Rpb2, domain 7
PfamPF04567, RNA polymerase Rpb2, domain 5
PfamPF04561, RNA polymerase Rpb2, domain 2

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Differentially expressed condition


11 conditions


SeriesControlTreatmentLog2FCAdj. P value
GSE33411IR24, control IR24, Xanthomonas oryzae pv. oryzae 3 h1.692.00E-09
GSE33411IRBB5, control IRBB5, Xanthomonas oryzae pv. oryzae 12 h1.757.36E-10
GSE33411IRBB5, control IRBB5, Xanthomonas oryzae pv. oryzae 3 h2.015.19E-11
GSE33411IRBB7, control IRBB7, Xanthomonas oryzae pv. oryzae 3 h1.511.92E-08
GSE62893Nipponbare, Pia, water 2 dNipponbare, Pia, Magnaporthe oryzae P91-15B 2 d2.112.59E-02
GSE62894Nipponbare, Pish, water 2 dNipponbare, Pish, Magnaporthe oryzae Kyu77-07A 2 d1.797.41E-03
GSE62894Nipponbare, Pish, water 3 dNipponbare, Pish, Magnaporthe oryzae Kyu77-07A 3 d2.151.46E-03
GSE62894Nipponbare, pish, water 2 dNipponbare, pish, Magnaporthe oryzae Kyu77-07A 2 d1.632.96E-02
GSE62894Nipponbare, pish, water 5 dNipponbare, pish, Magnaporthe oryzae Kyu77-07A 5 d-2.815.92E-06
GSE62895Nipponbare, Pia, water 3 dNipponbare, Pia, Magnaporthe oryzae P91-15B 3 d-3.552.01E-03
GSE62895Nipponbare, pia, water 3 dNipponbare, pia, Magnaporthe oryzae P91-15B 3 d-3.372.76E-03






Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.