Gene description
Orthologous
GO biological process
gene silencing by RNA, defense response to fungus, posttranscriptional gene silencing by RNA, production of siRNA involved in RNA interference, DNA methylation, regulation of transcription, DNA-templated, regulation of immune response, transcription
GO cellular component
nucleus, nuclear heterochromatin, DNA-directed RNA polymerase I complex, DNA-directed RNA polymerase V complex, DNA-directed RNA polymerase IV complex
GO molecular function
metal ion binding, RNA polymerase I activity, DNA binding, DNA-directed 5'-3' RNA polymerase activity, protein binding, ribonucleoside binding
Protein domain
Pfam | PF04567, RNA polymerase Rpb2, domain 5 |
Pfam | PF00562, RNA polymerase Rpb2, domain 6 |
Pfam | PF04561, RNA polymerase Rpb2, domain 2 |
Pfam | PF04563, RNA polymerase beta subunit |
Pfam | PF04565, RNA polymerase Rpb2, domain 3 |
Pfam | PF04560, RNA polymerase Rpb2, domain 7 |
Pfam | PF04566, RNA polymerase Rpb2, domain 4 |
Metabolic pathway
Not involved in metabolic pathway
KEGG pathway
Not involved in KEGG pathway
Coexpression network
Differentially expressed condition
3 conditions
Series | Control | Treatment | Log2FC | Adj. P value |
---|---|---|---|---|
GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 8 h | -1.51 | 5.92E-10 |
GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 8 h | -1.75 | 5.22E-11 |
GSE45214 | Col, med16, PstDC3000 AvrRpt2 0 h | Col, med16, PstDC3000 AvrRpt2 4 h | -1.51 | 1.91E-10 |
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