gene detail

Gene description

RAP-DB: OS02G0815200

Short description: Similar to 29 kDa ribonucleoprotein, chloroplast precursor (RNA-binding protein cp29).

Orthologous

Arabidopsis:

AT1G60000

Maize:

GRMZM5G841101

Wheat: No orthologous

GO biological process

unknown

GO cellular component

unknown

GO molecular function

nucleotide binding (GO:0000166), nucleic acid binding (GO:0003676)

Protein domain

Pfam	PF00076, RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
SMART	SM00360, RRM

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Coexpression network

GSE63047_T7174R  view
GSE33411_IRBB5  view
GSE16793_XOO  view
GSE16793_XOC  view
GSE33411_IRBB7  view
GSE62893_S_15B  view
GSE62893_R_15B  view
GSE33411_IR24  view
GSE63047_DELTAHRCV  view

Differentially expressed condition

19 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE33411	IRBB7, control	IRBB7, Xanthomonas oryzae pv. oryzae 12 h	1.70	4.88E-06
GSE33411	IRBB7, control	IRBB7, Xanthomonas oryzae pv. oryzae 3 h	1.54	2.90E-05
GSE36272	IR24, MOCK	IR24, Xanthomonas oryzae strain PXO86	-2.53	1.89E-03
GSE36272	IR24, MOCK	IR24, Xanthomonas oryzae strain _PXO99A	-3.10	8.40E-05
GSE36272	IR24, MOCK	IR24, Xanthomonas oryzae strain PXO99AME1	-2.32	3.48E-03
GSE36272	IR24, MOCK	IR24, Xanthomonas oryzae strain PXO99AME5	-2.90	2.00E-04
GSE36272	IR24, MOCK	IR24, Xanthomonas oryzae strain PXO99A_2	-2.80	3.20E-04
GSE36272	IR24, MOCK	IR24, Xanthomonas oryzae strain T7174	-2.30	5.71E-03
GSE36272	Nipponbare, MOCK	Nipponbare, Xanthomonas oryzae strain PXO99AME1	-3.21	7.28E-05
GSE36272	Nipponbare, MOCK	Nipponbare, Xanthomonas oryzae strain PXO99AME2	-3.27	6.50E-05
GSE36272	Nipponbare, MOCK	Nipponbare, Xanthomonas oryzae strain PXO99AME5	-1.86	2.56E-02
GSE36272	Nipponbare, MOCK	Nipponbare, Xanthomonas oryzae strain PXO99A_2	-3.42	2.64E-05
GSE36272	Nipponbare, MOCK	Nipponbare, Xanthomonas oryzae strain T7174	-3.00	1.84E-04
GSE62894	Nipponbare, pish, water 5 d	Nipponbare, pish, Magnaporthe oryzae Kyu77-07A 5 d	-6.08	9.07E-08
GSE62895	Nipponbare, pia, water 5 d	Nipponbare, pia, Magnaporthe oryzae P91-15B 5 d	-1.56	3.06E-03
GSE63047	Nipponbare, water 7 d	Nipponbare, Xanthomonas oryzae T7174R 7 d	-2.79	2.88E-04
GSE63337	Nipponbare, Osaba1_1, Xanthomonas oryzae pv. Oryzae PXO99 0 h	Nipponbare, Osaba1_1, Xanthomonas oryzae pv. Oryzae PXO99 72 h	-3.95	2.83E-05
GSE63337	Nipponbare, WT, Xanthomonas oryzae pv. Oryzae PXO99 0 h	Nipponbare, WT, Xanthomonas oryzae pv. Oryzae PXO99 72 h	-1.68	8.03E-03
GSE7256	Nipponbare, Mock 4 d	Nipponbare, Magnaporthe grisea FR13 5 d	-2.44	3.23E-03