gene detail

Gene description

RAP-DB: OS02G0527100

Short description: DEAD-like helicase, N-terminal domain containing protein.

Orthologous

Arabidopsis:

AT5G22750

Maize:

GRMZM2G030768

Wheat: No orthologous

GO biological process

unknown

GO cellular component

unknown

GO molecular function

nucleic acid binding (GO:0003676), DNA binding (GO:0003677), helicase activity (GO:0004386), protein binding (GO:0005515), ATP binding (GO:0005524), zinc ion binding (GO:0008270)

Protein domain

Pfam	PF13920, Zinc finger, C3HC4 type (RING finger)
Pfam	PF00176, SNF2 family N-terminal domain
Pfam	PF00271, Helicase conserved C-terminal domain
SMART	SM00184, RING
SMART	SM00490, HELICc
SMART	SM00487, DEXDc

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Coexpression network

GSE33411_IRBB7  view
GSE63047_T7174R  view
GSE33411_IRBB5  view
GSE62893_S_15B  view
GSE62893_R_15B  view
GSE63047_DELTAHRCV  view
GSE33411_IR24  view

Differentially expressed condition

5 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE33411	IR24, control	IR24, Xanthomonas oryzae pv. oryzae 3 h	1.78	1.61E-07
GSE33411	IRBB5, control	IRBB5, Xanthomonas oryzae pv. oryzae 12 h	2.25	1.34E-09
GSE33411	IRBB5, control	IRBB5, Xanthomonas oryzae pv. oryzae 3 h	1.86	8.11E-08
GSE33411	IRBB7, control	IRBB7, Xanthomonas oryzae pv. oryzae 12 h	2.11	4.24E-09
GSE62894	Nipponbare, pish, water 5 d	Nipponbare, pish, Magnaporthe oryzae Kyu77-07A 5 d	-1.98	7.16E-05