Gene: AT5G22750
     

Gene description


TAIR ID: AT5G22750

Short description: DNA/RNA helicase protein

Pathogen responsiveness: -3.61

General responsiveness: -4.00

Orthologous


Rice:

OS02G0527100   OS01G0779400   OS08G0180300  

Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


double-strand break repair via synthesis-dependent strand annealing, double-strand break repair via homologous recombination, DNA mediated transformation, covalent chromatin modification


GO cellular component


nucleus


GO molecular function


nucleic acid binding, ATP binding, helicase activity, zinc ion binding


Protein domain


PfamPF00176, SNF2 family N-terminal domain
PfamPF00271, Helicase conserved C-terminal domain
PfamPF08797, HIRAN domain
PfamPF13923, Zinc finger, C3HC4 type (RING finger)
SMARTSM00490, HELICc
SMARTSM00910, HIRAN
SMARTSM00184, RING
SMARTSM00487, DEXDc

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT2G36010, AT5G02470

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 5

click to view PPI network

Differentially expressed condition


1 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-1.821.44E-02






Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.