gene detail

Gene description

RAP-DB: OS02G0526400

Short description: Similar to ATP-dependent Clp protease ATP-binding subunit.

Orthologous

Arabidopsis:

AT5G51070

Maize:

GRMZM2G172230

Wheat: No orthologous

GO biological process

protein metabolic process (GO:0019538)

GO cellular component

unknown

GO molecular function

nucleotide binding (GO:0000166), ATP binding (GO:0005524), nucleoside-triphosphatase activity (GO:0017111)

Protein domain

Pfam	PF07724, AAA domain (Cdc48 subfamily)
Pfam	PF00004, ATPase family associated with various cellular activities (AAA)
Pfam	PF10431, C-terminal, D2-small domain, of ClpB protein
Pfam	PF02861, Clp amino terminal domain, pathogenicity island component
SMART	SM00382, AAA
SMART	SM01086, ClpB_D2-small

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Coexpression network

GSE62895_S_15B_ROOT  view
GSE63047_T7174R  view
GSE62893_S_15B  view
GSE16793_XOO  view
GSE62895_R_15B_ROOT  view

Differentially expressed condition

27 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE19239	Japonica 9804, control	Japonica 9804, X. oryzae pv. oryzicola	1.87	1.83E-04
GSE36272	IR24, MOCK	IR24, Xanthomonas oryzae strain PXO86	2.23	2.06E-08
GSE36272	IR24, MOCK	IR24, Xanthomonas oryzae strain _PXO99A	2.85	2.12E-11
GSE36272	IR24, MOCK	IR24, Xanthomonas oryzae strain PXO99AME1	2.63	1.97E-10
GSE36272	IR24, MOCK	IR24, Xanthomonas oryzae strain PXO99AME5	2.83	3.43E-11
GSE36272	IR24, MOCK	IR24, Xanthomonas oryzae strain PXO99A_2	2.63	1.25E-10
GSE36272	IR24, MOCK	IR24, Xanthomonas oryzae strain T7174	2.53	9.15E-10
GSE36272	Nipponbare, MOCK	Nipponbare, Xanthomonas oryzae strain BLS303	2.49	9.99E-10
GSE36272	Nipponbare, MOCK	Nipponbare, Xanthomonas oryzae strain PXO86	1.69	1.23E-05
GSE36272	Nipponbare, MOCK	Nipponbare, Xanthomonas oryzae strain _PXO99A	2.27	2.14E-08
GSE36272	Nipponbare, MOCK	Nipponbare, Xanthomonas oryzae strain PXO99AME5	2.11	1.08E-07
GSE36272	Nipponbare, MOCK	Nipponbare, Xanthomonas oryzae strain T7174	2.51	8.72E-10
GSE39635	WT, water 48 h	WT, Magnaporthe Oryzae 48 h	1.97	8.25E-03
GSE62893	Nipponbare, Pia, water 2 d	Nipponbare, Pia, Magnaporthe oryzae P91-15B 2 d	4.16	1.18E-04
GSE62893	Nipponbare, pia, water 2 d	Nipponbare, pia, Magnaporthe oryzae P91-15B 2 d	3.07	4.71E-03
GSE62893	Nipponbare, pia, water 3 d	Nipponbare, pia, Magnaporthe oryzae P91-15B 3 d	3.00	4.09E-03
GSE62894	Nipponbare, Pish, water 2 d	Nipponbare, Pish, Magnaporthe oryzae Kyu77-07A 2 d	4.72	2.54E-06
GSE62894	Nipponbare, Pish, water 3 d	Nipponbare, Pish, Magnaporthe oryzae Kyu77-07A 3 d	3.52	1.89E-04
GSE62894	Nipponbare, Pish, water 5 d	Nipponbare, Pish, Magnaporthe oryzae Kyu77-07A 5 d	2.76	2.84E-03
GSE62894	Nipponbare, pish, water 2 d	Nipponbare, pish, Magnaporthe oryzae Kyu77-07A 2 d	2.79	5.56E-03
GSE62894	Nipponbare, pish, water 3 d	Nipponbare, pish, Magnaporthe oryzae Kyu77-07A 3 d	3.62	1.27E-04
GSE62895	Nipponbare, Pia, water 3 d	Nipponbare, Pia, Magnaporthe oryzae P91-15B 3 d	-3.00	1.69E-02
GSE62895	Nipponbare, Pia, water 5 d	Nipponbare, Pia, Magnaporthe oryzae P91-15B 5 d	-2.90	3.07E-02
GSE62895	Nipponbare, pia, water 3 d	Nipponbare, pia, Magnaporthe oryzae P91-15B 3 d	-2.61	3.39E-02
GSE63047	Nipponbare, water 7 d	Nipponbare, Xanthomonas oryzae T7174R 7 d	2.19	1.24E-03
GSE7256	Nipponbare, Mock 3 d	Nipponbare, Magnaporthe grisea FR13 3 d	1.96	8.17E-03
GSE7256	Nipponbare, Mock 4 d	Nipponbare, Magnaporthe grisea FR13 5 d	7.00	4.22E-05