Maize: GRMZM2G461447
     

Gene description


maizeGDB: GRMZM2G461447


Short description: Putative RING finger U-box domain family protein


Orthologous


Arabidopsis: No orthologous
Rice:

OS05G0102600  

Wheat:

TA.9515.1.S1_AT  


GO biological process


chromatin organization, vegetative to reproductive phase transition of meristem, pericentric heterochromatin assembly, DNA methylation on cytosine, cell division

GO cellular component


nucleus, chromocenter

GO molecular function


chromatin binding, protein binding, zinc ion binding, methyl-CpG binding, double-stranded methylated DNA binding, methyl-CpNpG binding, methyl-CpNpN binding, histone binding, metal ion binding

Protein domain


PfamPF13445, RING-type zinc-finger
PfamPF02182, SAD/SRA domain
PfamPF13920, Zinc finger, C3HC4 type (RING finger)
SMARTSM00466, SRA
SMARTSM00184, RING
SMARTSM00249, PHD

Metabolic pathway


Not involved in metabolic pathway


Differentially expressed condition


11 conditions

SeriesControlTreatmentLog2FCAdj. P value
GSE10023Mock, 4.5 dSG200, 4.5 d4.474.05E-09
GSE10023Mock, 4 dSG200, 4 d3.361.82E-06
GSE10023Mock, 8 dSG200, 8 d1.832.18E-03
GSE19559Mock, 4 dSG200, 4 d3.364.16E-03
GSE19559Mock, 4 dSG200_fox1, 4 d2.083.56E-02
GSE48406Mock, 4 dSG200D19A, 4 d1.662.83E-02
GSE48406Mock, 4 dSG200Dtin1, 4 d2.793.02E-04
GSE48406Mock, 4 dSG200Dtin3, 4 d2.291.41E-03
GSE48406Mock, 4 dSG200Dtin4, 4 d1.881.06E-02
GSE48406Mock, 4 dSG200Dtin5, 4 d2.144.37E-03
GSE48406Mock, 4 dSG200, 4 d3.365.69E-05






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