co-expression network

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G461447

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010424: DNA methylation on cytosine within a CG sequence	0.00E+00
2	GO:0006268: DNA unwinding involved in DNA replication	0.00E+00
3	GO:0045732: positive regulation of protein catabolic process	0.00E+00
4	GO:0006260: DNA replication	2.65E-15
5	GO:0032508: DNA duplex unwinding	5.11E-13
6	GO:0006270: DNA replication initiation	1.20E-10
7	GO:0010069: zygote asymmetric cytokinesis in embryo sac	7.05E-07
8	GO:0007049: cell cycle	8.94E-07
9	GO:0090116: C-5 methylation of cytosine	6.39E-06
10	GO:0051726: regulation of cell cycle	5.80E-05
11	GO:0016572: histone phosphorylation	6.16E-05
12	GO:0006306: DNA methylation	1.09E-04
13	GO:0009556: microsporogenesis	1.21E-04
14	GO:0009971: anastral spindle assembly involved in male meiosis	1.21E-04
15	GO:0010216: maintenance of DNA methylation	1.21E-04
16	GO:0010425: DNA methylation on cytosine within a CNG sequence	1.21E-04
17	GO:0010389: regulation of G2/M transition of mitotic cell cycle	1.58E-04
18	GO:0009294: DNA mediated transformation	2.26E-04
19	GO:0009186: deoxyribonucleoside diphosphate metabolic process	3.00E-04
20	GO:0009755: hormone-mediated signaling pathway	3.00E-04
21	GO:0043987: histone H3-S10 phosphorylation	3.00E-04
22	GO:0046621: negative regulation of organ growth	3.00E-04
23	GO:0045814: negative regulation of gene expression, epigenetic	3.00E-04
24	GO:0022904: respiratory electron transport chain	5.17E-04
25	GO:0007276: gamete generation	5.17E-04
26	GO:0006275: regulation of DNA replication	7.41E-04
27	GO:0032147: activation of protein kinase activity	7.67E-04
28	GO:0006265: DNA topological change	1.05E-03
29	GO:0010082: regulation of root meristem growth	1.05E-03
30	GO:0043622: cortical microtubule organization	1.05E-03
31	GO:0060236: regulation of mitotic spindle organization	1.05E-03
32	GO:0032875: regulation of DNA endoreduplication	1.05E-03
33	GO:0051302: regulation of cell division	1.35E-03
34	GO:0051567: histone H3-K9 methylation	1.47E-03
35	GO:0009934: regulation of meristem structural organization	1.68E-03
36	GO:0051510: regulation of unidimensional cell growth	1.68E-03
37	GO:0006084: acetyl-CoA metabolic process	1.68E-03
38	GO:0006349: regulation of gene expression by genetic imprinting	1.68E-03
39	GO:0030245: cellulose catabolic process	2.01E-03
40	GO:0048449: floral organ formation	2.01E-03
41	GO:0051301: cell division	2.08E-03
42	GO:0007018: microtubule-based movement	2.31E-03
43	GO:0006342: chromatin silencing	2.35E-03
44	GO:0042127: regulation of cell proliferation	2.73E-03
45	GO:0012501: programmed cell death	3.14E-03
46	GO:0006259: DNA metabolic process	3.14E-03
47	GO:0016570: histone modification	3.14E-03
48	GO:0051225: spindle assembly	3.58E-03
49	GO:0009165: nucleotide biosynthetic process	4.02E-03
50	GO:0009909: regulation of flower development	4.19E-03
51	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	4.97E-03
52	GO:0015992: proton transport	5.98E-03
53	GO:0006310: DNA recombination	6.52E-03
54	GO:0009966: regulation of signal transduction	6.52E-03
55	GO:0006281: DNA repair	7.60E-03
56	GO:0009910: negative regulation of flower development	7.64E-03
57	GO:0048367: shoot system development	8.22E-03
58	GO:0000226: microtubule cytoskeleton organization	1.14E-02
59	GO:0009735: response to cytokinin	1.20E-02
60	GO:0009826: unidimensional cell growth	1.20E-02
61	GO:0016579: protein deubiquitination	1.27E-02
62	GO:0009790: embryo development	1.41E-02
63	GO:0042538: hyperosmotic salinity response	1.63E-02
64	GO:0000911: cytokinesis by cell plate formation	1.63E-02
65	GO:0009793: embryo development ending in seed dormancy	1.68E-02
66	GO:0008283: cell proliferation	2.20E-02
67	GO:0009624: response to nematode	2.20E-02
68	GO:0006200: obsolete ATP catabolic process	2.46E-02
69	GO:0048364: root development	2.55E-02
70	GO:0007275: multicellular organism development	2.64E-02
71	GO:0009555: pollen development	2.83E-02

Rank	GO Term	Adjusted P value
1	GO:0010997: anaphase-promoting complex binding	0.00E+00
2	GO:0003678: DNA helicase activity	1.20E-13
3	GO:0003688: DNA replication origin binding	7.05E-07
4	GO:0004748: ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor	2.68E-06
5	GO:0003886: DNA (cytosine-5-)-methyltransferase activity	6.39E-06
6	GO:0003677: DNA binding	9.69E-05
7	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	1.21E-04
8	GO:0003916: DNA topoisomerase activity	1.21E-04
9	GO:0035175: histone kinase activity (H3-S10 specific)	3.00E-04
10	GO:0008569: ATP-dependent microtubule motor activity, minus-end-directed	3.00E-04
11	GO:0008017: microtubule binding	3.80E-04
12	GO:0005524: ATP binding	5.94E-04
13	GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity	7.67E-04
14	GO:0003682: chromatin binding	9.83E-04
15	GO:0009678: hydrogen-translocating pyrophosphatase activity	1.05E-03
16	GO:0008810: cellulase activity	1.68E-03
17	GO:0003777: microtubule motor activity	2.31E-03
18	GO:0004427: inorganic diphosphatase activity	2.35E-03
19	GO:0000166: nucleotide binding	2.36E-03
20	GO:0046914: transition metal ion binding	3.14E-03
21	GO:0016651: oxidoreductase activity, acting on NAD(P)H	5.46E-03
22	GO:0019901: protein kinase binding	5.46E-03
23	GO:0004221: obsolete ubiquitin thiolesterase activity	5.46E-03
24	GO:0036459: thiol-dependent ubiquitinyl hydrolase activity	5.98E-03
25	GO:0008234: cysteine-type peptidase activity	1.95E-02
26	GO:0008168: methyltransferase activity	2.44E-02
27	GO:0016881: acid-amino acid ligase activity	2.73E-02
28	GO:0016887: ATPase activity	3.51E-02

Rank	GO Term	Adjusted P value
1	GO:0000307: cyclin-dependent protein kinase holoenzyme complex	0.00E+00
2	GO:0042555: MCM complex	1.85E-14
3	GO:0005971: ribonucleoside-diphosphate reductase complex	2.68E-06
4	GO:0000347: THO complex	1.21E-04
5	GO:0005769: early endosome	1.21E-04
6	GO:0005634: nucleus	3.85E-04
7	GO:0005819: spindle	4.97E-04
8	GO:0005874: microtubule	6.70E-04
9	GO:0005876: spindle microtubule	7.67E-04
10	GO:0005875: microtubule associated complex	1.12E-03
11	GO:0005871: kinesin complex	2.20E-03
12	GO:0009504: cell plate	5.98E-03
13	GO:0031966: mitochondrial membrane	6.52E-03
14	GO:0009524: phragmoplast	1.27E-02
15	GO:0045271: respiratory chain complex I	2.03E-02
16	GO:0005743: mitochondrial inner membrane	2.46E-02