Maize: GRMZM2G157727
     

Gene description


maizeGDB: GRMZM2G157727


Short description: Phytochrome


Orthologous


Arabidopsis:

AT1G09570  

Rice:

OS03G0719800  

Wheat: No orthologous

GO biological process


phosphorelay signal transduction system, transcription, DNA-templated, regulation of transcription, DNA-templated, signal transduction, detection of visible light, red, far-red light phototransduction, gravitropism, phototropism, red light signaling pathway, response to continuous far red light stimulus by the high-irradiance response system, response to very low fluence red light stimulus, protein-tetrapyrrole linkage, protein-chromophore linkage, signal transduction by protein phosphorylation, response to arsenic-containing substance, response to stimulus

GO cellular component


nucleus, cytoplasm, mitochondrion, membrane, nuclear body

GO molecular function


phosphorelay sensor kinase activity, signal transducer activity, protein binding, ATP binding, photoreceptor activity, protein homodimerization activity

Protein domain


PfamPF02518, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
PfamPF00360, Phytochrome region
PfamPF00989, PAS fold
PfamPF08446, PAS fold
PfamPF01590, GAF domain
SMARTSM00065, GAF
SMARTSM00387, HATPase_c
SMARTSM00091, PAS

Metabolic pathway


Not involved in metabolic pathway


Coexpression network



No coexpression gene



Differentially expressed condition


3 conditions

SeriesControlTreatmentLog2FCAdj. P value
GSE10023Mock, 4.5 dSG200, 4.5 d-2.111.19E-09
GSE48406Mock, 4 dSG200Dtin4, 4 d-1.592.79E-04
GSE48536Mock, 4 dSG200, 4 d-1.771.15E-05






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