Gene: AT5G66070
     

Gene description


TAIR ID: AT5G66070

Short description: RING/U-box superfamily protein

Pathogen responsiveness: 0.37

General responsiveness: -0.69

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


defense response, response to chitin


GO cellular component


integral component of membrane, mitochondrion


GO molecular function


metal ion binding


Protein domain


PfamPF13639, Ring finger domain
PfamPF13441, YMGG-like Gly-zipper
SMARTSM00184, RING

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT4G18770

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


26 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17464Laer, controlLaer, Flg22 1 h2.122.83E-07
GSE17464Penta, controlPenta, Flg22 2 h1.971.21E-06
GSE2169Col, rre1, waterCol, rre1, chitin 30 min1.504.20E-12
GSE2538Col, WT, controlCol, WT, crab shell chitin 30 min2.157.16E-07
GSE2538Col, WT, controlCol, WT, purified chitin octamer 30 min2.071.04E-06
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h1.748.28E-09
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h1.821.91E-09
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h2.492.08E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h1.851.17E-09
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h2.605.77E-13
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h1.898.05E-11
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h2.641.64E-13
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h2.082.27E-11
GSE4746Col, WT, water 30 minCol, WT, chitooctaose 30 min1.982.72E-04
GSE50526Col, WT, mock 9 hCol, WT, A. brassicicola 9 h2.391.29E-03
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h1.881.46E-08
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h1.522.68E-08
GSE56094Col, WT, control 7 hCol, WT, hrpA- 7 h1.562.48E-07
GSE56094Col, WT, control 8 hCol, WT, hrpA- 8 h1.661.99E-08
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h2.013.60E-03
GSE6556Col, gh3.5, controlCol, gh3.5, PstDC3000 AvrRpt2 48 h1.902.28E-05
GSE8319Col, WT, controlCol, WT, chitooctaose 30 min1.963.47E-12
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 2-4 h2.341.75E-04
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h2.364.53E-04
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 2-4 h2.056.21E-04
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h2.622.73E-04






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