Gene: AT5G65920
     

Gene description


TAIR ID: AT5G65920

Short description: ARM repeat superfamily protein

Pathogen responsiveness: NA

General responsiveness: NA

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


protein ubiquitination


GO cellular component


cytoplasm


GO molecular function


ubiquitin-protein transferase activity


Protein domain


PfamPF04564, U-box domain
SMARTSM00504, Ubox

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT2G38250, AT1G69490, AT1G24260

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


6 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE40544Col, WT, controlCol, WT, PstDC3000 AvrRpt21.662.07E-02
GSE40544Col, WT, controlCol, WT, PstDC3000 EV2.451.23E-03
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 AvrRpt21.721.72E-02
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h2.321.39E-12
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h1.773.04E-11
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h1.962.36E-11






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