Gene: AT5G65683
     

Gene description


TAIR ID: AT5G65683

Short description: Zinc finger (C3HC4-type RING finger) family protein

Pathogen responsiveness: NA

General responsiveness: NA

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


biological_process


GO cellular component


nucleus


GO molecular function


ubiquitin-protein transferase activity


Protein domain


PfamPF00092, von Willebrand factor type A domain
PfamPF17123, RING-like zinc finger
SMARTSM00184, RING
SMARTSM00327, VWA

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT1G24260, AT4G36990

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 27 (Top10%)

click to view PPI network

Coexpression network

GSE56094_WT_PSTDC3000  view

Differentially expressed condition


7 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-1.551.66E-11
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h-2.153.26E-15
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h-1.745.31E-11
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h-1.552.47E-09
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h-1.901.11E-12
GSE56094Col, WT, control 6 hCol, WT, PstDC3000 6 h-1.523.10E-08
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h-1.673.99E-10






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