Gene: AT5G64990
     

Gene description


TAIR ID: AT5G64990

Short description: RAB GTPase homolog H1A

Pathogen responsiveness: -1.75

General responsiveness: -3.00

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


retrograde transport, endosome to Golgi, retrograde vesicle-mediated transport, Golgi to ER, intra-Golgi vesicle-mediated transport, protein transport


GO cellular component


Golgi membrane, Golgi apparatus, mitochondrion


GO molecular function


GTP binding, GTPase activity


Protein domain


PfamPF00071, Ras family
SMARTSM00174, RHO
SMARTSM00173, RAS
SMARTSM00176, RAN
SMARTSM00175, RAB

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT4G36990

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


6 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17464Penta, controlPenta, Flg22 2 h1.602.15E-06
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h2.743.09E-15
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h2.275.20E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h1.837.04E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h1.797.95E-13
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h1.727.28E-08






Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.