gene detail

Gene description

TAIR ID: AT5G64740

Short description: cellulose synthase 6

Pathogen responsiveness: -1.58

General responsiveness: -2.67

Orthologous

Rice:

OS03G0837100 OS10G0341700

Maize:

GRMZM2G177631 GRMZM2G113137

Wheat: No orthologous gene

GO biological process

cortical microtubule organization, cellulose biosynthetic process, multidimensional cell growth, cell wall organization, plant-type primary cell wall biogenesis, plant-type cell wall biogenesis

GO cellular component

plasma membrane, membrane, integral component of plasma membrane, Golgi apparatus

GO molecular function

cellulose synthase activity, protein binding, transferase activity, transferring glycosyl groups

Protein domain

Pfam	PF14569, Zinc-binding RING-finger
Pfam	PF03552, Cellulose synthase

Metabolic pathway

PWY-1001: cellulose biosynthesis

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790, AT2G22300, AT1G24260, AT5G61850, AT1G19350

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 11 (Top20%)

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

4 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-1.51	4.81E-07
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-1.89	3.41E-03
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	-1.54	1.21E-11
GSE6556	Col, gh3.5, control	Col, gh3.5, PstDC3000 AvrRpt2 48 h	-1.53	2.90E-04