gene detail

Gene description

TAIR ID: AT5G62860

Short description: F-box associated ubiquitination effector family protein

Pathogen responsiveness: -0.50

General responsiveness: -1.26

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

biological_process

GO cellular component

nucleus

GO molecular function

molecular_function

Protein domain

Pfam	PF08268, F-box associated domain

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT1G24260, AT5G61850

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE26679_WT_GC  view
GSE13739_EDS16_GO  view
GSE26679_EDR1_GC  view

Differentially expressed condition

17 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17464	Laer, JA+Flg22 0 h	Laer, JA+Flg22 1 h	1.67	3.59E-03
GSE17464	Laer, control	Laer, Flg22 1 h	2.32	9.32E-06
GSE17464	Laer, control	Laer, Flg22 2 h	1.66	1.07E-03
GSE17464	Penta, control	Penta, Flg22 2 h	2.38	5.33E-06
GSE17464	Penta, control	Penta, Flg22 2 h	1.80	4.07E-04
GSE17500	Col, 35S:AFB1, control 0 h	Col, 35S:AFB1, PstDC3000 24 h	1.60	3.81E-04
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	1.61	2.44E-04
GSE17500	Col, miR393, control 0 h	Col, miR393, PstDC3000 24 h	1.60	3.36E-04
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	1.90	1.23E-07
GSE26679	Col, WT, GC 0 h	Col, WT, GC 18 h	1.66	4.19E-07
GSE26679	Col, WT, GC 0 h	Col, WT, GC 36 h	1.72	1.95E-07
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	1.99	1.04E-08
GSE40544	Col, WT, control	Col, WT, PstDC3000 AvrRpt2	2.04	1.62E-04
GSE40544	Col, WT, control	Col, WT, PstDC3000 EV	2.44	2.36E-05
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 AvrRpt2	1.62	1.29E-03
GSE50526	Col, WT, mock 9 h	Col, WT, A. brassicicola 9 h	2.03	3.53E-03
GSE5615	Col, WT, water 4 h	Col, WT, HrpZ 4 h	1.52	3.34E-06